RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CAGE1Q8TC20 777 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 BICD1Q96G01 975 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 OSBPL9Q96SU4 736 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 JPH2Q9BR39 696 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 FDXACB1Q9BRP7 624 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GINS2Q9Y248 185 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 C17orf102A2RUQ5 167 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 B4GALT5O43286 388 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 LBX1P52954 281 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GYS2P54840 703 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KIZQ2M2Z5 673 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GDF6Q6KF10 455 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 WNT8BQ93098 351 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SAAL1Q96ER3 474 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NOX5Q96PH1 765 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 LSM14BQ9BX40 385 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GANQ9H2C0 597 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TMEM206Q9H813 350 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 LUC7LQ9NQ29 371 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PLCB1Q9NQ66 1216 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ANKFY1Q9P2R3 1169 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SALL4Q9UJQ4 1053 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KIAA0100Q14667 2235 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ACLYP53396 1101 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NLRP11P59045 1033 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GFPT1Q06210 699 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 DPY19L2P1Q6NXN4 242 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CDR2LQ86X02 465 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SLC17A8Q8NDX2 589 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SPATA4Q8NEY3 305 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 COG1Q8WTW3 980 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HVCN1Q96D96 273 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TARS2Q9BW92 718 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CDHR5Q9HBB8 845 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
CDK5RAP3-202ENST00000536708 RRN3P2A6NIE6 340 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 INO80B-WBP1J3KQ70 363 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 K7ERI5 159 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MSCO60682 206 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 FGFR4P22455 802 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GPC3P51654 580 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 POLR2FP61218 127 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KCNH2Q12809 1159 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 STRN3Q13033 797 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HSP90B2PQ58FF3 399 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KLHDC7AQ5VTJ3 777 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 RNF180Q86T96 592 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 RDH13Q8NBN7 331 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 INO80BQ9C086 356 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NLRC4Q9NPP4 1024 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TRIP11Q15643 1979 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ZEB2O60315 1214 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KPNA6O60684 536 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 N4BP1O75113 896 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PRKCBP05771 671 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ADRB2P07550 413 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HARSP12081 509 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TMOD1P28289 359 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ACTN2P35609 894 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PTENP60484 403 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NAB2Q15742 525 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 RASSF4Q9H2L5 321 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PAK6Q9NQU5 681 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 DMAC2Q9NW81 257 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HPCAL4Q9UM19 191 aa13.98□□□□□ -0.17
CDK5RAP3-202ENST00000536708 A0A1W2PQ45 241 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 A0A1W2PQY0 241 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 H0YCG3 227 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 EXOC3O60645 756 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CCL5P13501 91 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TNFRSF8P28908 595 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 LIG4P49917 911 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 C2orf54Q08AI8 447 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TFDP1Q14186 410 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NFIL3Q16649 462 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GLE1Q53GS7 698 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 TDRD12Q587J7 1177 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ZBTB41Q5SVQ8 909 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 C10orf76Q5T2E6 689 aa13.97□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CBWD2Q8IUF1 395 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms