RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ANKRD62A6NC57 917 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ITGBL1O95965 494 aaPredicted RBP24.44■■□□□ 1.5
HMGA2-206ENST00000536545 PTENP60484 403 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 GRM1Q13255 1194 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 DUSP28Q4G0W2 176 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 NPLOC4Q8TAT6 608 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ARHGEF26Q96DR7 871 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 PCDHB18PQ96TA0 734 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 C16orf70Q9BSU1 422 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 NFKBIZQ9BYH8 718 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 NMRK2Q9NPI5 230 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 RNF14Q9UBS8 474 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ACKR2O00590 384 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ASAP2O43150 1006 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 CYP11B1P15538 503 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 SMPD1P17405 629 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ABCB4P21439 1286 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 TNFSF9P41273 254 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 FMO1Q01740 532 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 MBTD1Q05BQ5 628 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 BIRC3Q13489 604 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 SEZ6Q53EL9 994 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 TSHZ1Q6ZSZ6 1077 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 METTL13Q8N6R0 699 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 THAP2Q9H0W7 228 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 GOLPH3Q9H4A6 298 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 ACP6Q9NPH0 428 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 SMARCAL1Q9NZC9 954 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 EHD2Q9NZN4 543 aa24.44■■□□□ 1.5
HMGA2-206ENST00000536545 OGTO15294 1046 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 SEC31AO94979 1220 aaKnown RBP24.43■■□□□ 1.5
HMGA2-206ENST00000536545 KIF4AO95239 1232 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 TUBBP07437 444 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 CCDC181Q5TID7 509 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 ZBTB33Q86T24 672 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 MMGT1Q8N4V1 131 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 SPATA4Q8NEY3 305 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 OR5B17Q8NGF7 314 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 SLC35G2Q8TBE7 412 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 LMBR1Q8WVP7 490 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 ABHD16BQ9H3Z7 469 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 PTPRHQ9HD43 1115 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 STXBP5LQ9Y2K9 1186 aa24.43■■□□□ 1.5
HMGA2-206ENST00000536545 TARSL2A2RTX5 802 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 IGF2BP3O00425 579 aaKnown RBP eCLIP24.42■■□□□ 1.53e-6■■■□□ 17.3
HMGA2-206ENST00000536545 CES2O00748 559 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 PPFIA4O75335 1185 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 PDE6CP51160 858 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 VSNL1P62760 191 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 IGBP1P78318 339 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 CDR2Q01850 454 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 ACVR2BQ13705 512 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 TCEAL1Q15170 157 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 RPS6KA1Q15418 735 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 WDR44Q5JSH3 913 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 TAF3Q5VWG9 929 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 WDR93Q6P2C0 686 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 SYCE1Q8N0S2 351 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MSL3Q8N5Y2 521 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 DDX1Q92499 740 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 OSGEPQ9NPF4 335 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 FAM53CQ9NYF3 392 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 CPA4Q9UI42 421 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MAGEB2O15479 319 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MMP3P08254 477 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MMEP08473 750 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 GZMAP12544 262 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 HADHBP55084 474 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MORN1Q5T089 497 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 MPZL3Q6UWV2 235 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 WDR49Q8IV35 697 aa24.42■■□□□ 1.5
HMGA2-206ENST00000536545 HNRNPLLQ8WVV9 542 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 ZNF668Q96K58 619 aaPredicted RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 APOBEC3GQ9HC16 384 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 ZCCHC17Q9NP64 241 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 CPSF3Q9UKF6 684 aaKnown RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 ZHX1Q9UKY1 873 aaPredicted RBP24.42■■□□□ 1.5
HMGA2-206ENST00000536545 EVPLQ92817 2033 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 INO80B-WBP1J3KQ70 363 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 RTN2O75298 545 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 FTLP02792 175 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-206ENST00000536545 PAFAH1B1P43034 410 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 DNA2P51530 1060 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 AP3M2P53677 418 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 POU5F1BQ06416 359 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 CFAP221Q4G0U5 840 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 ATF7IP2Q5U623 682 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 IFNLR1Q8IU57 520 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-206ENST00000536545 MS4A14Q96JA4 679 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 TCHPQ9BT92 498 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 INO80BQ9C086 356 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-206ENST00000536545 MINDY3Q9H8M7 445 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 ABCB6Q9NP58 842 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 ARFGAP3Q9NP61 516 aa24.41■■□□□ 1.5
HMGA2-206ENST00000536545 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-206ENST00000536545 B4GALT5O43286 388 aa24.4■■□□□ 1.5
HMGA2-206ENST00000536545 ADCY6O43306 1168 aa24.4■■□□□ 1.5
HMGA2-206ENST00000536545 BUB1BO60566 1050 aaPredicted RBP24.4■■□□□ 1.5
HMGA2-206ENST00000536545 SPOPLQ6IQ16 392 aa24.4■■□□□ 1.5
HMGA2-206ENST00000536545 NT5DC3Q86UY8 548 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms