RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 FAPQ12884 760 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 PIN1Q13526 163 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 PPP2R5AQ15172 486 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 TERF2Q15554 542 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 SLC14A2Q15849 920 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 ABCB5Q2M3G0 1257 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 TRIM60Q495X7 471 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 CPZQ66K79 652 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 GALNT18Q6P9A2 607 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 RBM12BQ8IXT5 1001 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 AGBL3Q8NEM8 1001 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 USP33Q8TEY7 942 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 BBC3Q96PG8 261 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 AASDHPPTQ9NRN7 309 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 DSEQ9UL01 958 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 NIP7Q9Y221 180 aaKnown RBP eCLIP5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 SPEF1Q9Y4P9 236 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 TELO2Q9Y4R8 837 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 TAF6LQ9Y6J9 622 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 LAMA5O15230 3695 aa5.72□□□□□ -1.49
ECHDC1-223ENST00000534442 SCDO00767 359 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 COBLO75128 1261 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 TADA3O75528 432 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 MYOGP15173 224 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 SPINK2P20155 84 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 ITGB7P26010 798 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 ERVFC1P60507 584 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 PHC1P78364 1004 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 ZXDAP98168 799 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 RBM10P98175 930 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 CHRNEQ04844 493 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 TIGD5Q53EQ6 642 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 FIGNQ5HY92 759 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 UNQ6494/PRO21346Q6UXR6 183 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 ZBTB46Q86UZ6 589 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 DTX1Q86Y01 620 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 PDZD8Q8NEN9 1154 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 NUP43Q8NFH3 380 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 SCYL1Q96KG9 808 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 C8orf48Q96LL4 319 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 CDH19Q9H159 772 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 DEFB129Q9H1M3 183 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 ZMAT4Q9H898 229 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 CCDC39Q9UFE4 941 aa5.71□□□□□ -1.5
ECHDC1-223ENST00000534442 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 A0A1W2PQC6 194 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 A0A1W2PQD8 194 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 LCHNA4D1U4 455 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PDHXO00330 501 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 SLC27A2O14975 620 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PSPNO60542 156 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 ABLIM3O94929 683 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 MT-CO1P00395 513 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 LTFP02788 710 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 GLI4P10075 376 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 MYBL2P10244 700 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PLA2G2AP14555 144 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 FUT4P22083 530 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PTX3P26022 381 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 SLC6A11P48066 632 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 KIF11P52732 1056 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 RABGGTBP53611 331 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 EPHA5P54756 1037 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 SHC2P98077 582 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 NR0B2Q15466 257 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 ZNF174Q15697 407 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PTPN21Q16825 1174 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 NLRX1Q86UT6 975 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 RASSF3Q86WH2 238 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 SPPL2CQ8IUH8 684 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 RTKNQ9BST9 563 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 C14orf119Q9NWQ9 140 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 GABBR1Q9UBS5 961 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 EDC4Q6P2E9 1401 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 POLQO75417 2590 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 LRRC37AA6NMS7 1700 aa5.7□□□□□ -1.5
ECHDC1-223ENST00000534442 FITM1A5D6W6 292 aa5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 FAM90A27PA6NNH2 459 aa5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 ENO4A6NNW6 628 aa5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 H3BQ06 376 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 KRIT1O00522 736 aa5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 STARD3NLO95772 234 aa5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 PDGFBP01127 241 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-223ENST00000534442 HPXP02790 462 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms