RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 GPAA1O43292 621 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CYTH3O43739 400 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PRLP01236 227 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CDH3P22223 829 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CHRNA3P32297 505 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 BPIFB4P59827 614 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MAPRE2Q15555 327 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 OR2W6PQ8NHA6 318 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DEPTORQ8TB45 409 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PLEKHF1Q96S99 279 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MED10Q9BTT4 135 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DSCC1Q9BVC3 393 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MYH8P13535 1937 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 TMEM120BA0PK00 339 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MBD4O95243 580 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 GHRP10912 638 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SOX6P35712 828 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DYNLT1P63172 113 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PRKG1Q13976 671 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CTTNQ14247 550 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SGSM1Q2NKQ1 1148 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CCDC153Q494R4 210 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SPDYE2Q495Y8 402 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 TMCO1Q9UM00 188 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 LEMD3Q9Y2U8 911 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 ADAMTS13Q76LX8 1427 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 STX7O15400 261 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 GFPT2O94808 682 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 KRT1P04264 644 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CIITAP33076 1130 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CAPRIN1Q14444 709 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NWD1Q149M9 1564 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 CNGA2Q16280 664 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 GANCQ8TET4 914 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 APPBP2Q92624 585 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PNKPQ96T60 521 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NDNQ99608 321 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 ALG13Q9NP73 1137 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 HACD3Q9P035 362 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 HBS1LQ9Y450 684 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 RECQLP46063 649 aaPredicted RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MTF1Q14872 753 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DARS2Q6PI48 645 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 YAF2Q8IY57 180 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 TRMT2AQ8IZ69 625 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 OR8H2Q8N162 312 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SPON1Q9HCB6 807 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SRPRBQ9Y5M8 271 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 RGS20O76081 388 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 TECP42680 631 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 YWHAHQ04917 246 aaPredicted RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 RNF219Q5W0B1 726 aaPredicted RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 SDE2Q6IQ49 451 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NOA1Q8NC60 698 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NACC1Q96RE7 527 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DDX20Q9UHI6 824 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 DBR1Q9UK59 544 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MIF4GDA9UHW6 222 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 ITGADQ13349 1161 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 HABP4Q5JVS0 413 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 PRPF39Q86UA1 669 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 LRRC34Q8IZ02 419 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MDM1Q8TC05 714 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 AGBL1Q96MI9 1066 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
CSRP1-218ENST00000533402 NDST4Q9H3R1 872 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 AMACRQ9UHK6 382 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 ADCY9O60503 1353 aa8.26□□□□□ -1.09
CSRP1-218ENST00000533402 LRRN2O75325 713 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 FKBP3Q00688 224 aaKnown RBP8.25□□□□□ -1.09
CSRP1-218ENST00000533402 STAT4Q14765 748 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 FAM26FQ5R3K3 315 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 ARMC4Q5T2S8 1044 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 RHOT2Q8IXI1 618 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 METTL13Q8N6R0 699 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 SLC13A1Q9BZW2 595 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 HESX1Q9UBX0 185 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 MON2Q7Z3U7 1717 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 GOLGA8JA6NMD2 632 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 PI4K2BG5E9Z4 385 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 GOLGA8TH3BQL2 631 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 BBOX1O75936 387 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 KLHL2O95198 593 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 PYGMP11217 842 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 GCLCP48506 637 aaPredicted RBP8.25□□□□□ -1.09
CSRP1-218ENST00000533402 DHX34Q14147 1143 aaKnown RBP8.25□□□□□ -1.09
CSRP1-218ENST00000533402 NCAPHQ15003 741 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 SNX30Q5VWJ9 437 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 KRT39Q6A163 491 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
CSRP1-218ENST00000533402 ARHGEF1Q92888 912 aaKnown RBP8.25□□□□□ -1.09
CSRP1-218ENST00000533402 CCDC127Q96BQ5 260 aa8.25□□□□□ -1.09
CSRP1-218ENST00000533402 TMA16Q96EY4 203 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms