RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NOL7Q9UMY1 257 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 A0A087WZ62 844 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 SOBPA7XYQ1 873 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 GDF9O60383 454 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 EFEMP2O95967 443 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 POMCP01189 267 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 PTMSP20962 102 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 CNR2P34972 360 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 OR1G1P47890 313 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 CCR3P51677 355 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 FZD5Q13467 585 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 MRPL10Q7Z7H8 261 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 CHRDQ9H2X0 955 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 UBN1Q9NPG3 1134 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 ZMIZ1Q9ULJ6 1067 aa12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 PRG3Q9Y2Y8 225 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-213ENST00000533149 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 IGLV3-22A0A075B6J6 115 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 MAN2B1O00754 1011 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 YEATS4O95619 227 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 TRAPPC10P48553 1259 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 PRKCEQ02156 737 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 STK38Q15208 465 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 PCDHB6Q9Y5E3 794 aa12.53□□□□□ -0.4
TRAPPC4-213ENST00000533149 TM4SF5O14894 197 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 SPTLC2O15270 562 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 ZNF862O60290 1169 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 XYLBO75191 536 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 ECI2O75521 394 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 CYP3A4P08684 503 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 DRP2Q13474 957 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 PTPAQ15257 358 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 ZNF174Q15697 407 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 INF2Q27J81 1249 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 AASDHQ4L235 1098 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 TTC38Q5R3I4 469 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 DNASE1L2Q92874 299 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 MBOAT7Q96N66 472 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 HEBP1Q9NRV9 189 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-213ENST00000533149 WNT7AO00755 349 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 TRAK2O60296 914 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 HOXA9P31269 272 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 NTHL1P78549 312 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 FBXW11Q9UKB1 542 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
TRAPPC4-213ENST00000533149 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 HRO43593 1189 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 EDIL3O43854 480 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 SFNP31947 248 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 CXCL12P48061 93 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 ME1P48163 572 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 UBE2HP62256 183 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 DSC1Q08554 894 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 ITFG1Q8TB96 612 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 B3GALT6Q96L58 329 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
TRAPPC4-213ENST00000533149 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms