RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 KPNA7A9QM74 516 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 GNGT2O14610 69 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 SYF2O95926 243 aaKnown RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 YY1P25490 414 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 EIF3BP55884 814 aaKnown RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 ROR1Q01973 937 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 ARHGEF7Q14155 803 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 MAP1SQ66K74 1059 aaPredicted RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 C18orf8Q96DM3 657 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 MTG1Q9BT17 334 aaPredicted RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 PHF20Q9BVI0 1012 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 SPTLC3Q9NUV7 552 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 INTS9Q9NV88 658 aaKnown RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 USP32Q8NFA0 1604 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 A0A087WWV3 80 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 DFFAO00273 331 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 APOL1O14791 398 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 DNAJC6O75061 913 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 NPTXRO95502 500 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 RRAGDQ9NQL2 400 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 KCNH7Q9NS40 1196 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 PCSK1NQ9UHG2 260 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 MSCO60682 206 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 MFAP3LO75121 409 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 TOM1L1O75674 476 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 CUL1Q13616 776 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 NCOA4Q13772 614 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 RNF217Q8TC41 542 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 RABGGTAQ92696 567 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 CCDC124Q96CT7 223 aaKnown RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 GDAP1L1Q96MZ0 367 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 TUBB6Q9BUF5 446 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 FAM96AQ9H5X1 160 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 SUN1O94901 812 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 EFHD1Q9BUP0 239 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 DSEQ9UL01 958 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 RASGRF2O14827 1237 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 BAG2O95816 211 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 SLC2A3P11169 496 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 MUTP22033 750 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 SLC1A1P43005 524 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 WASHC5Q12768 1159 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 TRIP13Q15645 432 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 MRPS31Q92665 395 aaKnown RBP11.34□□□□□ -0.59
COLCA1-203ENST00000532918 PPP1R13BQ96KQ4 1090 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 CATSPERBQ9H7T0 1116 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 KANSL3Q9P2N6 904 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
COLCA1-203ENST00000532918 ENC1O14682 589 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 CCT5P48643 541 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 PPATQ06203 517 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 EIF2B5Q13144 721 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 EXT2Q93063 718 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 CEMIPQ8WUJ3 1361 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 EXTL3O43909 919 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 RALBP11234 206 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 AKR1A1P14550 325 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 RAB27AP51159 221 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 FBXW4P57775 412 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 ACTR2P61160 394 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 EGFL8Q99944 293 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 ITM2BQ9Y287 266 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 FGGP02679 453 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 AMHP03971 560 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 RPL10AP62906 217 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 SYTL3Q4VX76 610 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 IL1R1P14778 569 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 POLE2P56282 527 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 EXOSC10Q01780 885 aaKnown RBP11.33□□□□□ -0.6
COLCA1-203ENST00000532918 PLD1Q13393 1074 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms