RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SLC38A7Q9NVC3 462 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 IRF1P10914 325 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 CAP2P40123 477 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SPARCL1Q14515 664 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 CHST13Q8NET6 341 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 CCDC138Q96M89 665 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 BPIFA3Q9BQP9 254 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 HDAC6Q9UBN7 1215 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 ZNF197O14709 1029 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SRGNP10124 158 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TCF7P36402 384 aaPredicted RBP15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TRIM68Q6AZZ1 485 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TAF11Q15544 211 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 KIF19Q2TAC6 998 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 ANO4Q32M45 955 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 DCAF4L1Q3SXM0 396 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SCFD2Q8WU76 684 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 PARVAQ9NVD7 372 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SPATA31D1Q6ZQQ2 1576 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 PPP1R12AO14974 1030 aaPredicted RBP15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TFRCP02786 760 aaKnown RBP15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 TMPRSS15P98073 1019 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SNX17Q15036 470 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 CCDC144BQ3MJ40 725 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 PCDHB8Q9UN66 801 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 CTDNEP1O95476 244 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 ST8SIA6P61647 398 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 IFT88Q13099 833 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 GNASQ5JWF2 1037 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 SH3KBP1Q96B97 665 aa15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 ADARB2Q9NS39 739 aaKnown RBP15.64■□□□□ 0.09
PCDHA9-202ENST00000532602 DDX5P17844 614 aaKnown RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 PDCD2Q16342 344 aaPredicted RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 IMPG1Q17R60 797 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 KRT82Q9NSB4 513 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 WDR35Q9P2L0 1181 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 DDTLA6NHG4 134 aaPredicted RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 ESRRAP11474 423 aaPredicted RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 ESRRGP62508 458 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 FMR1Q06787 632 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 KCNB1Q14721 858 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 TMEM132DQ14C87 1099 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 SEZ6Q53EL9 994 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 MAML1Q92585 1016 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 THOC1Q96FV9 657 aaKnown RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 TRIM9Q9C026 710 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 WNT8AQ9H1J5 351 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 SARS2Q9NP81 518 aaKnown RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 SLC16A3O15427 465 aaKnown RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 COPS2P61201 443 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 ROR1Q01973 937 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 FSCBQ5H9T9 825 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 DPF2Q92785 391 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 PI4K2BG5E9Z4 385 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 AP3B1O00203 1094 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 SLC37A4O43826 429 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 NR1D1P20393 614 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 SULT1E1P49888 294 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 NPEPPSP55786 919 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 DGKDQ16760 1214 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 HABP4Q5JVS0 413 aaKnown RBP15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 KAZALD1Q96I82 304 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 CENPKQ9BS16 269 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 CD4P01730 458 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 GTF2A2P52657 109 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 ACAD11Q709F0 780 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 RMDN2Q96LZ7 410 aa15.63■□□□□ 0.09
PCDHA9-202ENST00000532602 RGL2O15211 777 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 CHRNA3P32297 505 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 KCTD17Q8N5Z5 321 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 ASAP3Q8TDY4 903 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 CPA4Q9UI42 421 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 NPTXRO95502 500 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 TRIM55Q9BYV6 548 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 SNCBQ16143 134 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 OPTNQ96CV9 577 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 VPS11Q9H270 941 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 CFLARO15519 480 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 GRIN1Q05586 938 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 DPYDQ12882 1025 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 EGFL8Q99944 293 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 TRAIPQ9BWF2 469 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 KLK14Q9P0G3 267 aa15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
PCDHA9-202ENST00000532602 USP27XA6NNY8 438 aa15.61■□□□□ 0.09
PCDHA9-202ENST00000532602 MYO1DO94832 1006 aa15.61■□□□□ 0.09
PCDHA9-202ENST00000532602 CYP2C9P11712 490 aa15.61■□□□□ 0.09
PCDHA9-202ENST00000532602 LIG3P49916 1009 aa15.61■□□□□ 0.09
PCDHA9-202ENST00000532602 FCGRTP55899 365 aa15.61■□□□□ 0.09
PCDHA9-202ENST00000532602 TGFB2P61812 414 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms