RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
COPB1-208ENST00000532088 CDT1Q9H211 546 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
COPB1-208ENST00000532088 C9IYK1 514 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 OGTO15294 1046 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
COPB1-208ENST00000532088 EOMESO95936 686 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 NR3C1P04150 777 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 GRM5P41594 1212 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 FAM189BP81408 668 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
COPB1-208ENST00000532088 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 SLC24A5Q71RS6 500 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
COPB1-208ENST00000532088 HACE1Q8IYU2 909 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 FAM160A2Q8N612 972 aaPredicted RBP13.64□□□□□ -0.23
COPB1-208ENST00000532088 POMGNT1Q8WZA1 660 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 ADAM2Q99965 735 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 MKNK1Q9BUB5 465 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 AGO2Q9UKV8 859 aaKnown RBP13.64□□□□□ -0.23
COPB1-208ENST00000532088 CTNND2Q9UQB3 1225 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
COPB1-208ENST00000532088 ENPP3O14638 875 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 IKBKBO14920 756 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 CETN3O15182 167 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 EXTL3O43909 919 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 FAM189A1O60320 539 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 MGEA5O60502 916 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 ANO6Q4KMQ2 910 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 MSS51Q4VC12 460 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 XXYLT1Q8NBI6 393 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 LINC01599Q8WXQ3 324 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 CBWD1Q9BRT8 395 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 HAPLN2Q9GZV7 340 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 HSPBP1Q9NZL4 362 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
COPB1-208ENST00000532088 ZMYND8Q9ULU4 1186 aaPredicted RBP13.63□□□□□ -0.23
COPB1-208ENST00000532088 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 TISP43B9A030 160 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 NPTXRO95502 500 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 GNA14O95837 355 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 FGBP02675 491 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 ADRB2P07550 413 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 CLTAP09496 248 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 NR2F2P24468 414 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 PMS1P54277 932 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 MYL5Q02045 173 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 ADAM9Q13443 819 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 SPATA1Q5VX52 437 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 FILIP1Q7Z7B0 1213 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 RTN4RL1Q86UN2 441 aaPredicted RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 CCDC94Q9BW85 323 aaPredicted RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 GZF1Q9H116 711 aaPredicted RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 MTIF3Q9H2K0 278 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 CPSF3Q9UKF6 684 aaKnown RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 USP20Q9Y2K6 914 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 FRMD4BQ9Y2L6 1034 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
COPB1-208ENST00000532088 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
COPB1-208ENST00000532088 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.61□□□□□ -0.23
COPB1-208ENST00000532088 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 CLIC2O15247 247 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 INPPL1O15357 1258 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 EXOC3O60645 756 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 STAG3L1P0CL83 205 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 SYN1P17600 705 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 PSMC2P35998 433 aaKnown RBP13.61□□□□□ -0.23
COPB1-208ENST00000532088 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.23
COPB1-208ENST00000532088 ZNF165P49910 485 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
COPB1-208ENST00000532088 TCTN1Q2MV58 587 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 TMEM240Q5SV17 173 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 LRRC55Q6ZSA7 311 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 C16orf59Q7L2K0 433 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms