RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MTHFD2P13995 350 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 AGXTP21549 392 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 SESN2P58004 480 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 ZXDAP98168 799 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 HGFACQ04756 655 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PRKD1Q15139 912 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 MUM1Q2TAK8 710 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 ANO4Q32M45 955 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 SPDYAQ5MJ70 313 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 POLNQ7Z5Q5 900 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 OR14K1Q8NGZ2 314 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 TSPEARQ8WU66 669 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 GAB3Q8WWW8 586 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 HIST1H2AHQ96KK5 128 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 ADOQ96SZ5 270 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 HIST1H2AJQ99878 128 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 NOL10Q9BSC4 688 aaKnown RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PLA2G12BQ9BX93 195 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 EVLQ9UI08 416 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 SCOCQ9UIL1 159 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 THRAP3Q9Y2W1 955 aaKnown RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 TESMINQ9Y4I5 508 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA8Q9Y5G5 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA3Q9Y5H0 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA2Q9Y5H1 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 COL22A1Q8NFW1 1626 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-212ENST00000529046 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 ALDH1L1O75891 902 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 LPLP06858 475 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 NEK2P51955 445 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 MCL1Q07820 350 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 DUSP8Q13202 625 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 ABCB5Q2M3G0 1257 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 GAREM2Q75VX8 874 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 CLEC14AQ86T13 490 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 DDX17Q92841 729 aaKnown RBP6.28□□□□□ -1.4
CSDE1-212ENST00000529046 LPPQ93052 612 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 CHMP4CQ96CF2 233 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 C14orf93Q9H972 538 aaKnown RBP6.28□□□□□ -1.4
CSDE1-212ENST00000529046 TRPC5Q9UL62 973 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-212ENST00000529046 MYOM2P54296 1465 aa6.28□□□□□ -1.4
CSDE1-212ENST00000529046 A0A1W2PR48 441 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 NRP2O60462 931 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 LGALS4P56470 323 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 ADAM8P78325 824 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 ADAM15Q13444 863 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 MAN2A1Q16706 1144 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 UNC5BQ8IZJ1 945 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 AUTS2Q8WXX7 1259 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 EDAQ92838 391 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 GFM2Q969S9 779 aaKnown RBP6.27□□□□□ -1.41
CSDE1-212ENST00000529046 WDR92Q96MX6 357 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 CAMKK2Q96RR4 588 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 GPR45Q9Y5Y3 372 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 PXDNQ92626 1479 aa6.27□□□□□ -1.41
CSDE1-212ENST00000529046 ATRNO75882 1429 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 YTHDC2Q9H6S0 1430 aaKnown RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 MTSS1O43312 755 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 TMEM127O75204 238 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 ACO1P21399 889 aaKnown RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 SRSF2Q01130 221 aaKnown RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 PPARAQ07869 468 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 SPIDRQ14159 915 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 TTF1Q15361 905 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 TMEM240Q5SV17 173 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 FAM89AQ96GI7 184 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 PAWRQ96IZ0 340 aaKnown RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 VPS11Q9H270 941 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 NELFAQ9H3P2 528 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 DNAJC28Q9NX36 388 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 MAGEL2Q9UJ55 1249 aa6.26□□□□□ -1.41
CSDE1-212ENST00000529046 DHX57Q6P158 1386 aaKnown RBP6.26□□□□□ -1.41
CSDE1-212ENST00000529046 SPATA31A3Q5VYP0 1347 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 RGS12O14924 1447 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 KNDC1Q76NI1 1749 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 C2orf78A6NCI8 922 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 PPM1GO15355 546 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-212ENST00000529046 SLC26A4O43511 780 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 ABLIM3O94929 683 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 LY86O95711 162 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 GAAP10253 952 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 C6P13671 934 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 TACR2P21452 398 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 SLC5A3P53794 718 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 EPHB1P54762 984 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSDE1-212ENST00000529046 ADRM1Q16186 407 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 TOR2AQ5JU69 321 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 GPR135Q8IZ08 494 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 SHCBP1Q8NEM2 672 aa6.25□□□□□ -1.41
CSDE1-212ENST00000529046 JADE3Q92613 823 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms