RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 GLUD1P00367 558 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 WEE2P0C1S8 567 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 EPCAMP16422 314 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 HOXB8P17481 243 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 SLC12A3P55017 1021 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 GRIN1Q05586 938 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 ZP2Q05996 745 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 COASYQ13057 564 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 CBX2Q14781 532 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 PTPN14Q15678 1187 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 HYIQ5T013 277 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 FAM171A1Q5VUB5 890 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 TMC5Q6UXY8 1006 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 SV2BQ7L1I2 683 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 PDILTQ8N807 584 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 SMRP1Q8NCR6 262 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 SNX21Q969T3 373 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 B3GALT6Q96L58 329 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 CLIC6Q96NY7 704 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 USP28Q96RU2 1077 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 ACO2Q99798 780 aaKnown RBP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 PHF7Q9BWX1 381 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-210ENST00000528441 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 CDT1Q9H211 546 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 SFXN1Q9H9B4 322 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 MARCH5Q9NX47 278 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 TNFSF13BQ9Y275 285 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
CMTM1-210ENST00000528441 DCXO43602 365 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 TRAK2O60296 914 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 B3GAT3O94766 335 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 EDN1P05305 212 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 CNPP09543 421 aaKnown RBP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 MCF2P10911 925 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 GRM5P41594 1212 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 MTHFRP42898 656 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 CREMQ03060 361 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 ELAVL2Q12926 359 aaKnown RBP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 SEZ6Q53EL9 994 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 TMEM31Q5JXX7 168 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 LIN9Q5TKA1 542 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 HAUS6Q7Z4H7 955 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 DAW1Q8N136 415 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 CEP120Q8N960 986 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 VN1R2Q8NFZ6 395 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 SPIRE2Q8WWL2 714 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 EPSTI1Q96J88 318 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 MSLNLQ96KJ4 702 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 FBXL18Q96ME1 805 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 NECTIN4Q96NY8 510 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 KLHL5Q96PQ7 755 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 EPHX3Q9H6B9 360 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 MAN1C1Q9NR34 630 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 SLC38A7Q9NVC3 462 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 STK17AQ9UEE5 414 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 SRPRBQ9Y5M8 271 aaKnown RBP9.93□□□□□ -0.82
CMTM1-210ENST00000528441 TRANK1O15050 2925 aa9.93□□□□□ -0.82
CMTM1-210ENST00000528441 CITO14578 2027 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 MYH15Q9Y2K3 1946 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 F8W810 466 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 SPTLC2O15270 562 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 XPOTO43592 962 aaKnown RBP9.92□□□□□ -0.82
CMTM1-210ENST00000528441 TRAPPC3O43617 180 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 TOM1L1O75674 476 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 CLSTN1O94985 981 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 KIF4AO95239 1232 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 GCNT3O95395 438 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 ABCD1P33897 745 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 MCM4P33991 863 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 ARPP19P56211 112 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 ITIH3Q06033 890 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 DSC1Q08554 894 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 MAPK7Q13164 816 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 PSMD5Q16401 504 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 TAS1R1Q7RTX1 841 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 SYCP3Q8IZU3 236 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 ZBTB45Q96K62 511 aaPredicted RBP9.92□□□□□ -0.82
CMTM1-210ENST00000528441 UROC1Q96N76 676 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 TTPALQ9BTX7 342 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 MSTO1Q9BUK6 570 aa9.92□□□□□ -0.82
CMTM1-210ENST00000528441 CCSER1Q9C0I3 900 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms