RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SLC22A17Q8WUG5 538 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 RIN2Q8WYP3 895 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-213ENST00000527897 SUSD6Q92537 303 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 PANK2Q9BZ23 570 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 PARVGQ9HBI0 331 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 DZANK1Q9NVP4 752 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
CAPN1-213ENST00000527897 SF3B1O75533 1304 aaKnown RBP eCLIP17.01■□□□□ 0.314e-6■■■■■ 34.5
CAPN1-213ENST00000527897 CITO14578 2027 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 H0YCG3 227 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 TEX28O15482 410 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 MCF2P10911 925 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 DDIT3P35638 169 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 CLCN4P51793 760 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 NCKAP1LP55160 1127 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
CAPN1-213ENST00000527897 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 USP41Q3LFD5 358 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 RRAGBQ5VZM2 374 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 TMC5Q6UXY8 1006 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 HAUS6Q7Z4H7 955 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
CAPN1-213ENST00000527897 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 ADAM7Q9H2U9 754 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 GOLGA2P5Q9HBQ8 144 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 PTPRHQ9HD43 1115 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 MUTYHQ9UIF7 546 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
CAPN1-213ENST00000527897 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 CLDN3O15551 220 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 DCXO43602 365 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 LILRB3O75022 631 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 TOM1L1O75674 476 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 ALADP13716 330 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 RPL17P18621 184 aaKnown RBP17■□□□□ 0.31
CAPN1-213ENST00000527897 LIG4P49917 911 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 DSG1Q02413 1049 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 ITIH3Q06033 890 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 NAB2Q15742 525 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 FAM171A1Q5VUB5 890 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 PALB2Q86YC2 1186 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 RNF135Q8IUD6 432 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
CAPN1-213ENST00000527897 ZNF396Q96N95 335 aaPredicted RBP17■□□□□ 0.31
CAPN1-213ENST00000527897 TRIOO75962 3097 aa17■□□□□ 0.31
CAPN1-213ENST00000527897 SMIM28A0A1B0GU29 152 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 HNRNPDLO14979 420 aaKnown RBP16.99■□□□□ 0.31
CAPN1-213ENST00000527897 TRAK2O60296 914 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 B3GAT3O94766 335 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 PROZP22891 400 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 NMT1P30419 496 aaKnown RBP16.99■□□□□ 0.31
CAPN1-213ENST00000527897 STAT6P42226 847 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 CLCNKBP51801 687 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 TMEM31Q5JXX7 168 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 PRSS55Q6UWB4 352 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-213ENST00000527897 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 SPATA31D4Q6ZUB0 917 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 PDILTQ8N807 584 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 RIPOR3Q96MK2 946 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 PPP1R10Q96QC0 940 aaKnown RBP16.99■□□□□ 0.31
CAPN1-213ENST00000527897 POMKQ9H5K3 350 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 CHST7Q9NS84 486 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 TBX20Q9UMR3 447 aa16.99■□□□□ 0.31
CAPN1-213ENST00000527897 LOC730098B7Z3J9 87 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 ABLIM1O14639 778 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 SPTLC2O15270 562 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 EFEMP2O95967 443 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 GLUD1P00367 558 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 MTHFRP42898 656 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 ZNF131P52739 623 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 RTP2Q5QGT7 225 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 ATAT1Q5SQI0 421 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 FEZF2Q8TBJ5 459 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 SNX27Q96L92 541 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 NECTIN4Q96NY8 510 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 TTPALQ9BTX7 342 aa16.98■□□□□ 0.31
CAPN1-213ENST00000527897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.98■□□□□ 0.31
CAPN1-213ENST00000527897 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-213ENST00000527897 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 CXCL8P10145 99 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 IGFBP6P24592 240 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 MCL1Q07820 350 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 PSMD5Q16401 504 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 ZC2HC1CQ53FD0 456 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 ELMSAN1Q6PJG2 1045 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 SFR1Q86XK3 245 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 LINC00301Q8NCQ3 95 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms