RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 COL4A3Q01955 1670 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 RNASET2O00584 256 aaKnown RBP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 PCSK1P29120 753 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 IARSP41252 1262 aaKnown RBP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 PER3P56645 1201 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 COL10A1Q03692 680 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 LY6G5CQ5SRR4 150 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 KCNV1Q6PIU1 500 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 FAM180AQ6UWF9 173 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 MRI1Q9BV20 369 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 PUS7LQ9H0K6 701 aaKnown RBP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 SLC23A1Q9UHI7 598 aa9.97□□□□□ -0.81
CTNND1-217ENST00000527599 AJAP1Q9UKB5 411 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-217ENST00000527599 GRID2IPA4D2P6 1211 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 NDUFA10O95299 355 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 SNRPA1P09661 255 aaKnown RBP9.96□□□□□ -0.82
CTNND1-217ENST00000527599 ALDH1A3P47895 512 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 CDKN1CP49918 316 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-217ENST00000527599 RAP2BP61225 183 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 NECAB2Q7Z6G3 386 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 DPF2Q92785 391 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 PHACTR3Q96KR7 559 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 MYOCQ99972 504 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 LANCL2Q9NS86 450 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 ZBTB21Q9ULJ3 1066 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 DNM3Q9UQ16 869 aa9.96□□□□□ -0.82
CTNND1-217ENST00000527599 RAMP2O60895 175 aa9.95□□□□□ -0.82
CTNND1-217ENST00000527599 AGAP9Q5VTM2 703 aa9.95□□□□□ -0.82
CTNND1-217ENST00000527599 PLXDC1Q8IUK5 500 aa9.95□□□□□ -0.82
CTNND1-217ENST00000527599 ZGPATQ8N5A5 531 aaKnown RBP9.95□□□□□ -0.82
CTNND1-217ENST00000527599 PPM1NQ8N819 430 aa9.95□□□□□ -0.82
CTNND1-217ENST00000527599 SENP6Q9GZR1 1112 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-217ENST00000527599 ACTL7AQ9Y615 435 aa9.95□□□□□ -0.82
CTNND1-217ENST00000527599 GAGE12BA1L429 117 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 AMY1AP04745 511 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 IL2RBP14784 551 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 PROZP22891 400 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 AMPD3Q01432 767 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 FSTL1Q12841 308 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 PTPAQ15257 358 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 KRTAP15-1Q3LI76 137 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
CTNND1-217ENST00000527599 GJC2Q5T442 439 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-217ENST00000527599 C1orf162Q8NEQ5 155 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-217ENST00000527599 ADAM2Q99965 735 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 MAP3K2Q9Y2U5 619 aa9.94□□□□□ -0.82
CTNND1-217ENST00000527599 MARCH11A6NNE9 402 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 ENDOD1O94919 500 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 RAP2AP10114 183 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 MED25Q71SY5 747 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 NRG4Q8WWG1 115 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 JADE3Q92613 823 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 CCDC8Q9H0W5 538 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-217ENST00000527599 TUBD1Q9UJT1 453 aa9.93□□□□□ -0.82
CTNND1-217ENST00000527599 TMEM191CA6NGB0 347 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA12O60330 932 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PRSS23O95084 383 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
CTNND1-217ENST00000527599 OTUD7BQ6GQQ9 843 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PGM2L1Q6PCE3 622 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 ARHGEF19Q8IW93 802 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 AMOTL1Q8IY63 956 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 CPEB3Q8NE35 698 aaKnown RBP9.92□□□□□ -0.82
CTNND1-217ENST00000527599 SERHL2Q9H4I8 314 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 FBXO34Q9NWN3 711 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA9Q9Y5G4 932 aaKnown RBP9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA8Q9Y5G5 932 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA7Q9Y5G6 932 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA6Q9Y5G7 932 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 PCDHGA3Q9Y5H0 932 aa9.92□□□□□ -0.82
CTNND1-217ENST00000527599 CCDC78A2IDD5 438 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 FZD9O00144 591 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 MT-CO1P00395 513 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 ELANEP08246 267 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 ATP5JP18859 108 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 SLC6A2P23975 617 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 BMPR1AP36894 532 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 ZEB1P37275 1124 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-217ENST00000527599 ATP8B2P98198 1209 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 MTM1Q13496 603 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 MTMR1Q13613 665 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 CLUL1Q15846 466 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 RNF187Q5TA31 235 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-217ENST00000527599 RHOT2Q8IXI1 618 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 OR56A1Q8NGH5 318 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 GPR150Q8NGU9 434 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 CCHCR1Q8TD31 782 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 CASKIN2Q8WXE0 1202 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 WDR11Q9BZH6 1224 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 MOCS1Q9NZB8 636 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
CTNND1-217ENST00000527599 UNC119BA6NIH7 251 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms