RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	FNIP2	Q9P278	1114 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	ANKFY1	Q9P2R3	1169 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	TRAPPC3	O43617	180 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	TBCA	O75347	108 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	TOM1L1	O75674	476 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	KIF4A	O95239	1232 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	C1R	P00736	705 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	HSP90AA1	P07900	732 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	WEE2	P0C1S8	567 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	MAPT	P10636	758 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	CACNB1	Q02641	598 aa	Predicted RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	REST	Q13127	1097 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	GLRA4	Q5JXX5	417 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	FAM171A1	Q5VUB5	890 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	C15orf39	Q6ZRI6	1047 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	TAS1R3	Q7RTX0	852 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	GPR149	Q86SP6	731 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PLCD3	Q8N3E9	789 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	MYCT1	Q8N699	235 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	TMEM161B	Q8NDZ6	487 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	HDAC7	Q8WUI4	952 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	LARP4B	Q92615	738 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	RAD54L	Q92698	747 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	EDA	Q92838	391 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	B3GALT6	Q96L58	329 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PPP1R10	Q96QC0	940 aa	Known RBP	13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	REEP2	Q9BRK0	252 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PAAF1	Q9BRP4	392 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	TTPAL	Q9BTX7	342 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	CCSER1	Q9C0I3	900 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	ZHX3	Q9H4I2	956 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PLEKHA4	Q9H4M7	779 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PARVG	Q9HBI0	331 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	PTPRH	Q9HD43	1115 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	CACNG4	Q9UBN1	327 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	CLIC4	Q9Y696	253 aa		13.79	□□□□□ -0.2
RBBP4-215	ENST00000524393	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	TMEM189-UBE2V1	I3L0A0	370 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393		K7ENM7	598 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CLDN3	O15551	220 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	STX6	O43752	255 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	B3GAT3	O94766	335 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	BRD1	O95696	1058 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	PROZ	P22891	400 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	MARCKS	P29966	332 aa	Predicted RBP	13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	NCKAP1L	P55160	1127 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CEBPZ	Q03701	1054 aa	Known RBP	13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	GRIN1	Q05586	938 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	MCM6	Q14566	821 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	NAB2	Q15742	525 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	ARSH	Q5FYA8	562 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	DCLRE1A	Q6PJP8	1040 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CYP26C1	Q6V0L0	522 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CCDC149	Q6ZUS6	474 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	HAUS6	Q7Z4H7	955 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	PALB2	Q86YC2	1186 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	GLYCTK	Q8IVS8	523 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	HSCB	Q8IWL3	235 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CEP120	Q8N960	986 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	ACSF2	Q96CM8	615 aa	Predicted RBP	13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	DDX27	Q96GQ7	796 aa	Known RBP	13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	CDH22	Q9UJ99	828 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	UST	Q9Y2C2	406 aa		13.78	□□□□□ -0.2
RBBP4-215	ENST00000524393	SMIM28	A0A1B0GU29	152 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	CCDC195	A0A1B0GUA6	201 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	TRAK2	O60296	914 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PDIA4	P13667	645 aa	Known RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	KCNA4	P22459	653 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	DDIT3	P35638	169 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	LIG4	P49917	911 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	CLCNKB	P51801	687 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PLXNA3	P51805	1871 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZXDA	P98168	799 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	MUC3A	Q02505	3323 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PTPA	Q15257	358 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PSMD5	Q16401	504 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	KYAT1	Q16773	422 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PTPN21	Q16825	1174 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	RTP2	Q5QGT7	225 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	KANK3	Q6NY19	840 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	OTOP3	Q7RTS5	596 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	KRI1	Q8N9T8	703 aa	Known RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	CMAS	Q8NFW8	434 aa	Predicted RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PIK3R5	Q8WYR1	880 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	SNX21	Q969T3	373 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	SNX27	Q96L92	541 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	CXCL16	Q9H2A7	254 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	PIDD1	Q9HB75	910 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	BLOC1S4	Q9NUP1	217 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	STK17A	Q9UEE5	414 aa		13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	FBXO2	Q9UK22	296 aa	Predicted RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	SRPRB	Q9Y5M8	271 aa	Known RBP	13.77	□□□□□ -0.21
RBBP4-215	ENST00000524393	C2CD4D	B7Z1M9	353 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	HNRNPDL	O14979	420 aa	Known RBP	13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	TGM5	O43548	720 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	KCNE1	P15382	129 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	RPL17	P18621	184 aa	Known RBP	13.76	□□□□□ -0.21

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