RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SIGLEC14Q08ET2 396 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 NAB2Q15742 525 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 CCDC149Q6ZUS6 474 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 CMASQ8NFW8 434 aaPredicted RBP11.95□□□□□ -0.5
PVT1-216ENST00000523068 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 RIN2Q8WYP3 895 aaPredicted RBP11.95□□□□□ -0.5
PVT1-216ENST00000523068 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
PVT1-216ENST00000523068 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 UROC1Q96N76 676 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 PLIN2Q99541 437 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TTPALQ9BTX7 342 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 KCNH6Q9H252 994 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 PTPRHQ9HD43 1115 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 SLC38A7Q9NVC3 462 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 CDH22Q9UJ99 828 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 ODF2LQ9ULJ1 636 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TRIOO75962 3097 aa11.95□□□□□ -0.5
PVT1-216ENST00000523068 TMEM221A6NGB7 291 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 SFI1A8K8P3 1242 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 M0R296 226 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 TRAPPC3O43617 180 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 KIF4AO95239 1232 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 PROZP22891 400 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 PLA2G5P39877 138 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 MTMR3Q13615 1198 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 FAM171A1Q5VUB5 890 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 OTOP3Q7RTS5 596 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 TAS1R3Q7RTX0 852 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 BMP8AQ7Z5Y6 402 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 UBALD2Q8IYN6 164 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 ZDHHC14Q8IZN3 488 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 B3GALT6Q96L58 329 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 ACAP3Q96P50 834 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 PPP1R10Q96QC0 940 aaKnown RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 TARS2Q9BW92 718 aaKnown RBP11.94□□□□□ -0.5
PVT1-216ENST00000523068 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 CDT1Q9H211 546 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 CACNG4Q9UBN1 327 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 SORCS3Q9UPU3 1222 aa11.94□□□□□ -0.5
PVT1-216ENST00000523068 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 CCDC195A0A1B0GUA6 201 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 TGM5O43548 720 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 TOM1L1O75674 476 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 BRD1O95696 1058 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 KRT18P05783 430 aaKnown RBP11.93□□□□□ -0.5
PVT1-216ENST00000523068 MAPTP10636 758 aaKnown RBP11.93□□□□□ -0.5
PVT1-216ENST00000523068 ABCD1P33897 745 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 NOLC1Q14978 699 aaKnown RBP eCLIP11.93□□□□□ -0.56e-11■■■■□ 21.2
PVT1-216ENST00000523068 PSMD5Q16401 504 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 ALKAL1Q6UXT8 129 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 ZPBP2Q6X784 338 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.93□□□□□ -0.5
PVT1-216ENST00000523068 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 PALB2Q86YC2 1186 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 TMEM161BQ8NDZ6 487 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 PIK3R5Q8WYR1 880 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 STAMQ92783 540 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
PVT1-216ENST00000523068 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 ZDHHC7Q9NXF8 308 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 TECTAO75443 2155 aa11.93□□□□□ -0.5
PVT1-216ENST00000523068 KMT2EQ8IZD2 1858 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 CLDN3O15551 220 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 B3GAT3O94766 335 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 FAM13AO94988 1023 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 PAPLNO95428 1278 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 HARSP12081 509 aaKnown RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 PLCG1P19174 1290 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 SYT1P21579 422 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■□□□□ 10.6
PVT1-216ENST00000523068 CLCNKBP51801 687 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 NCKAP1LP55160 1127 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 OSTNP61366 133 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 KARSQ15046 597 aaKnown RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 UPP1Q16831 310 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 ARSHQ5FYA8 562 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms