RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 APOL6Q9BWW8 343 aa27.87■■■□□ 2.05
NKX2-1-204ENST00000522719 RNF39Q9H2S5 420 aa27.87■■■□□ 2.05
NKX2-1-204ENST00000522719 TMEM161AQ9NX61 479 aa27.87■■■□□ 2.05
NKX2-1-204ENST00000522719 PARP2Q9UGN5 583 aa27.87■■■□□ 2.05
NKX2-1-204ENST00000522719 GIT1Q9Y2X7 761 aa27.87■■■□□ 2.05
NKX2-1-204ENST00000522719 TTC26A0AVF1 554 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 LRRC10BA6NIK2 292 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 FGBP02675 491 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 AKAP5P24588 427 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 C16orf59Q7L2K0 433 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 FNBP1Q96RU3 617 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 TSPAN18Q96SJ8 248 aa27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 LIMA1Q9UHB6 759 aaKnown RBP27.86■■■□□ 2.05
NKX2-1-204ENST00000522719 ATP1A3P13637 1013 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 ALKAL1Q6UXT8 129 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 SNX27Q96L92 541 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 TUBGCP2Q9BSJ2 902 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 PDE11AQ9HCR9 933 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 PCDHB7Q9Y5E2 793 aa27.85■■■□□ 2.05
NKX2-1-204ENST00000522719 LACTBL1A8MY62 500 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 CLDN10P78369 228 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 KRT31Q15323 416 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 MAN2A1Q16706 1144 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 XKR4Q5GH76 650 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 AGMOQ6ZNB7 445 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 CCDC127Q96BQ5 260 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 TDRD15B5MCY1 1934 aaKnown RBP27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 STX10O60499 249 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 TPM2P07951 284 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 RGS19P49795 217 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 ZNF365Q70YC5 407 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 NT5DC4Q86YG4 428 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 NPAS4Q8IUM7 802 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 CRIPAKQ8N1N5 446 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 RNF169Q8NCN4 708 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 PLEKHO2Q8TD55 490 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 LPPQ93052 612 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 SLC35C1Q96A29 364 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 FAM212AQ96EL1 285 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 RSAD1Q9HA92 442 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 CNTN3Q9P232 1028 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 LRFN2Q9ULH4 789 aa27.84■■■□□ 2.05
NKX2-1-204ENST00000522719 GOLGA6L3A6NEY3 463 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 MEFVO15553 781 aaPredicted RBP27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 AMHP03971 560 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 TMEM240Q5SV17 173 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 TCERG1LQ5VWI1 586 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 WDR49Q8IV35 697 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 RSPH1Q8WYR4 309 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 CGRRF1Q99675 332 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 PCDH10Q9P2E7 1040 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 DERAQ9Y315 318 aa27.83■■■□□ 2.05
NKX2-1-204ENST00000522719 MEIS3P2A8K0S8 358 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 INPPL1O15357 1258 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 HOXA2O43364 376 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 DLATP10515 647 aaKnown RBP27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 PRKCSHP14314 528 aaPredicted RBP27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 AP3M2P53677 418 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 WNT7BP56706 349 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 DCAF17Q5H9S7 520 aaPredicted RBP27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 C2CD2Q9Y426 696 aa27.82■■■□□ 2.04
NKX2-1-204ENST00000522719 FSD2A1L4K1 749 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 LRRIQ3A6PVS8 624 aaPredicted RBP27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 KCNE1P15382 129 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 TNNI1P19237 187 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 GTF2H1P32780 548 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 KCNJ6P48051 423 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 COPB1P53618 953 aaKnown RBP27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 EPHB4P54760 987 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 WDR5P61964 334 aaKnown RBP27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 DLG4P78352 724 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 GSE1Q14687 1217 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 OTOP2Q7RTS6 562 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 APTXQ7Z2E3 356 aaKnown RBP27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 KLK14Q9P0G3 267 aa27.81■■■□□ 2.04
NKX2-1-204ENST00000522719 ARL5CA6NH57 179 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 SERPINC1P01008 464 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 IBSPP21815 317 aaPredicted RBP27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 MLH1P40692 756 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 FANCCQ00597 558 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 VWA3BQ502W6 1294 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 C1orf220Q5T0J3 134 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 GLB1LQ6UWU2 654 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 CACTINQ8WUQ7 758 aaKnown RBP27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 HERVK_113Q902F9 699 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 TOP1MTQ969P6 601 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 RPS6KC1Q96S38 1066 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 GAD1Q99259 594 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 TAB2Q9NYJ8 693 aa27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 FNDC1Q4ZHG4 1894 aaPredicted RBP27.8■■■□□ 2.04
NKX2-1-204ENST00000522719 SMIM28A0A1B0GU29 152 aa27.79■■■□□ 2.04
NKX2-1-204ENST00000522719 OFD1O75665 1012 aa27.79■■■□□ 2.04
NKX2-1-204ENST00000522719 AFPP02771 609 aaKnown RBP27.79■■■□□ 2.04
NKX2-1-204ENST00000522719 TRIM49P0CI25 452 aa27.79■■■□□ 2.04
NKX2-1-204ENST00000522719 TRIM49CP0CI26 452 aa27.79■■■□□ 2.04
NKX2-1-204ENST00000522719 KCNH2Q12809 1159 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms