RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.31□□□□□ -1.72
HMGN1P28-201ENST00000521340 PNPOQ9NVS9 261 aa4.31□□□□□ -1.72
HMGN1P28-201ENST00000521340 ING3Q9NXR8 418 aa4.31□□□□□ -1.72
HMGN1P28-201ENST00000521340 CROTQ9UKG9 612 aa4.31□□□□□ -1.72
HMGN1P28-201ENST00000521340 CFAP69A5D8W1 941 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 F2RL2O00254 374 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 TBX3O15119 743 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 MTSS1O43312 755 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 HOXA5P20719 270 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 RPL13P26373 211 aaKnown RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 CRHR1P34998 444 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 BUD31P41223 144 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 KIR2DL3P43628 341 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADCY7P51828 1080 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 WNT3AP56704 352 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 CTXN1P60606 82 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 CAP1Q01518 475 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 SAFB2Q14151 953 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 PCOLCEQ15113 449 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 PPP4R3AQ6IN85 833 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 TMED8Q6PL24 325 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 Q6ZUG5 572 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 SAPCD2Q86UD0 394 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ENAHQ8N8S7 591 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 PLA2G15Q8NCC3 412 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 REPS2Q8NFH8 660 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 MAML1Q92585 1016 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 SLC35A4Q96G79 324 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZC3H10Q96K80 434 aaKnown RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 FAM167AQ96KS9 214 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ARMT1Q9H993 441 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 PPCSQ9HAB8 311 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 LMBRD1Q9NUN5 540 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 TDP1Q9NUW8 608 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 SIRT5Q9NXA8 310 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 GPRC5DQ9NZD1 345 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 COL20A1Q9P218 1284 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 RGS17Q9UGC6 210 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 STAP2Q9UGK3 403 aa4.3□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADAMTS20P59510 1910 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 MYBBP1AQ9BQG0 1328 aaKnown RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 CCDC189A1A4V9 331 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ISM1B1AKI9 464 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 KPNA5O15131 536 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 PHGDHO43175 533 aaKnown RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 SEMA7AO75326 666 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 FGF18O76093 207 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ALDH1A2O94788 518 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 GASTP01350 101 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 SBK3P0C264 359 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 PFKLP17858 780 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 EN2P19622 333 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 DDCP20711 480 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 TNFSF4P23510 183 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ECHS1P30084 290 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 CSF2RBP32927 897 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 KCNQ1P51787 676 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 CHAF1AQ13111 956 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADAM15Q13444 863 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 GJC2Q5T442 439 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 EMC10Q5UCC4 262 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF572Q7Z3I7 529 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 PQLC1Q8N2U9 271 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF480Q8WV37 535 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 CASKIN2Q8WXE0 1202 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 CFHR4Q92496 578 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 GFM2Q969S9 779 aaKnown RBP4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 KIAA1191Q96A73 305 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 TNIP3Q96KP6 325 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 WRNIP1Q96S55 665 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 SPATA25Q9BR10 227 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 COLEC11Q9BWP8 271 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 TRIM54Q9BYV2 358 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 MAF1Q9H063 256 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 LDAHQ9H6V9 325 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 TLR9Q9NR96 1032 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 ABCF2Q9UG63 623 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 SLC23A1Q9UHI7 598 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 TPCN1Q9ULQ1 816 aa4.29□□□□□ -1.72
HMGN1P28-201ENST00000521340 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 H3BUI4 141 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ITGA10O75578 1167 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ARIH2O95376 493 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 MATN4O95460 622 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 FOSP01100 380 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF888P0CJ79 500 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 PAX3P23760 479 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 SLC6A4P31645 630 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 PPM1AP35813 382 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 HALP42357 657 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 MRE11P49959 708 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 STK3Q13188 491 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ACAP1Q15027 740 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms