RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 PDXDC1Q6P996 788 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 TAS1R3Q7RTX0 852 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
PVT1-209ENST00000520913 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 SYT2Q8N9I0 419 aaPredicted RBP11.79□□□□□ -0.52
PVT1-209ENST00000520913 RIN2Q8WYP3 895 aaPredicted RBP11.79□□□□□ -0.52
PVT1-209ENST00000520913 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
PVT1-209ENST00000520913 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 B3GALT6Q96L58 329 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 UROC1Q96N76 676 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 KCNG1Q9UIX4 513 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 DOCK6Q96HP0 2047 aa11.79□□□□□ -0.52
PVT1-209ENST00000520913 H0YCG3 227 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 SLC16A4O15374 487 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PLA2G4BP0C869 781 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 MCF2P10911 925 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PLS3P13797 630 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PDCP20941 246 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 SMTNP53814 917 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 RAD51AP2Q09MP3 1159 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 STRN3Q13033 797 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PSMD5Q16401 504 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 GLRA4Q5JXX5 417 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 RTP2Q5QGT7 225 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 MPZL3Q6UWV2 235 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 OTOP3Q7RTS5 596 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 CEP120Q8N960 986 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 KREMEN2Q8NCW0 462 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PBXIP1Q96AQ6 731 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 PPP1R10Q96QC0 940 aaKnown RBP11.78□□□□□ -0.52
PVT1-209ENST00000520913 TTPALQ9BTX7 342 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 CXCL16Q9H2A7 254 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 ZDHHC7Q9NXF8 308 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 LARSQ9P2J5 1176 aaKnown RBP11.78□□□□□ -0.52
PVT1-209ENST00000520913 ODF2LQ9ULJ1 636 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 CLUHO75153 1309 aa11.78□□□□□ -0.52
PVT1-209ENST00000520913 CCDC195A0A1B0GUA6 201 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 TGM5O43548 720 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 BRD1O95696 1058 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 PROZP22891 400 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.53
PVT1-209ENST00000520913 UBA7P41226 1012 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 NOLC1Q14978 699 aaKnown RBP eCLIP11.77□□□□□ -0.536e-11■■■■□ 21.2
PVT1-209ENST00000520913 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
PVT1-209ENST00000520913 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
PVT1-209ENST00000520913 CEP57Q86XR8 500 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 SMG7Q92540 1137 aaKnown RBP11.77□□□□□ -0.53
PVT1-209ENST00000520913 STAMQ92783 540 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 ASIC4Q96FT7 647 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 SNX27Q96L92 541 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 PLIN2Q99541 437 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 TARS2Q9BW92 718 aaKnown RBP11.77□□□□□ -0.53
PVT1-209ENST00000520913 PTPRHQ9HD43 1115 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 ANKFY1Q9P2R3 1169 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 MIA3Q5JRA6 1907 aa11.77□□□□□ -0.53
PVT1-209ENST00000520913 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 NOTCH4Q99466 2003 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 ABLIM1O14639 778 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 TOM1L1O75674 476 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 RFPL2O75678 378 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 PAPLNO95428 1278 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 MAPTP10636 758 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 HARSP12081 509 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 RPL17P18621 184 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 CLCNKBP51801 687 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 OSTNP61366 133 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 SF3A1Q15459 793 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 ZPBP2Q6X784 338 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 GPBP1Q86WP2 473 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 TMEM161BQ8NDZ6 487 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 TCHPQ9BT92 498 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 GOLGA2P5Q9HBQ8 144 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 WDR6Q9NNW5 1121 aaKnown RBP11.76□□□□□ -0.53
PVT1-209ENST00000520913 CNTN3Q9P232 1028 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 FBXW11Q9UKB1 542 aa11.76□□□□□ -0.53
PVT1-209ENST00000520913 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 B3GAT3O94766 335 aa11.75□□□□□ -0.53
PVT1-209ENST00000520913 ASGR2P07307 311 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms