RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 KLF6Q99612 283 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 SCOCQ9UIL1 159 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 POLD1P28340 1107 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 PIAS1O75925 651 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 MFAP3P55082 362 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 RASA3Q14644 834 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 NOP9Q86U38 636 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 FAM13CQ8NE31 585 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 MKNK1Q9BUB5 465 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 WHRNQ9P202 907 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 STOML1Q9UBI4 398 aa13.65□□□□□ -0.22
TRAPPC9-208ENST00000520857 PI4K2BG5E9Z4 385 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 CD58P19256 250 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 TAC1P20366 129 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 FOXN2P32314 431 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 P3H1Q32P28 736 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 GBP5Q96PP8 586 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 NACC1Q96RE7 527 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 PCDHB18PQ96TA0 734 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 TMEM109Q9BVC6 243 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 NARFQ9UHQ1 456 aa13.65□□□□□ -0.23
TRAPPC9-208ENST00000520857 GYG2O15488 501 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 GJB6O95452 261 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 RALAP11233 206 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 BMP3P12645 472 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 RFC5P40937 340 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 MAGEA4P43358 317 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 CLK2P49760 499 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 STAT4Q14765 748 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZNF720Q7Z2F6 126 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 ATL2Q8NHH9 583 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 OLFML3Q9NRN5 406 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 BAG2O95816 211 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 SKIP12755 728 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 PTDSS1P48651 473 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 GRIK3Q13003 919 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 DPY19L2P1Q6NXN4 242 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 CCDC62Q6P9F0 684 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 PASD1Q8IV76 773 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-208ENST00000520857 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 MAN1A1P33908 653 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ABL2P42684 1182 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 RCN1Q15293 331 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 GALNTL6Q49A17 601 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ANKMY2Q8IV38 441 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CPA5Q8WXQ8 436 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 NT5C1BQ96P26 610 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZNF577Q9BSK1 485 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 TMEM117Q9H0C3 514 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CYP39A1Q9NYL5 469 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 IKBKGQ9Y6K9 419 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 MEIS2O14770 477 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 KIF22Q14807 665 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZBED8Q8IZ13 594 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 TEX9Q8N6V9 391 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 XXYLT1Q8NBI6 393 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 BICD1Q96G01 975 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 SPDYE5A6NIY4 337 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 RRM1P23921 792 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 MARK3P27448 753 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 PEX5P50542 639 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 RNF43Q68DV7 783 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms