RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ASB7Q9H672 318 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PDE11AQ9HCR9 933 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PRDM5Q9NQX1 630 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-208ENST00000520561 SNTG2Q9NY99 539 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 GCNT4Q9P109 453 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 IMPACTQ9P2X3 320 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 IPPQ9Y573 584 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PCDHB2Q9Y5E7 798 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 NBNO60934 754 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PHACTR2O75167 634 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 RECQL4O94761 1208 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CLSTN1O94985 981 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 ITGA4P13612 1032 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM21P19474 475 aaKnown RBP9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CYP2C18P33260 490 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 RFC2P35250 354 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 DEKP35659 375 aaKnown RBP9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PIK3CAP42336 1068 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CCL23P55773 120 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 GSDMDP57764 484 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CLDN10P78369 228 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 TFAMQ00059 246 aaKnown RBP9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PPP3CAQ08209 521 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 DSC3Q14574 896 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PTPN21Q16825 1174 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CBWD6Q4V339 395 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 UMODL1Q5DID0 1318 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CBWD3Q5JTY5 395 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CBWD5Q5RIA9 395 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 C1orf220Q5T0J3 134 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 LMBRD2Q68DH5 695 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PPFIBP1Q86W92 1011 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 NT5DC4Q86YG4 428 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM192Q8IY95 271 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 NEK11Q8NG66 645 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CACTINQ8WUQ7 758 aaKnown RBP9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PGBD4Q96DM1 585 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 SCLYQ96I15 445 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 SNX27Q96L92 541 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 RPS6KC1Q96S38 1066 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PPP1R9BQ96SB3 815 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 ADAM2Q99965 735 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 CRACR2AQ9BSW2 395 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 OSBPL7Q9BZF2 842 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 MTMR12Q9C0I1 747 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM117Q9H0C3 514 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 TMX1Q9H3N1 280 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 C1orf112Q9NSG2 853 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PRKAG2Q9UGJ0 569 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 SIK3Q9Y2K2 1263 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 HES2Q9Y543 173 aa9.69□□□□□ -0.86
CSMD1-208ENST00000520561 PTPRJQ12913 1337 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 TTC26A0AVF1 554 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 LACTBL1A8MY62 500 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 PMM2O15305 246 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 XPOTO43592 962 aaKnown RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 MGEA5O60502 916 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 NFICP08651 508 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 IBSPP21815 317 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 WNT7BP56706 349 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM132DQ14C87 1099 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 DUOXA2Q1HG44 320 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 SLC10A6Q3KNW5 377 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 ZACNQ401N2 412 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 PLEKHG4Q58EX7 1191 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 JADE1Q6IE81 842 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 UBE2Q1Q7Z7E8 422 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 EFCAB13Q8IY85 973 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 RNF169Q8NCN4 708 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 CCDC150Q8NCX0 1101 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 SMG8Q8ND04 991 aaKnown RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 FBXL13Q8NEE6 735 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 KIF12Q96FN5 646 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 POP1Q99575 1024 aaKnown RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 IMPG2Q9BZV3 1241 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 INTS2Q9H0H0 1204 aaKnown RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 WNT8AQ9H1J5 351 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 FAM207AQ9NSI2 230 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 CNTN3Q9P232 1028 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 DERAQ9Y315 318 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 R3HCC1Q9Y3T6 440 aaKnown RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 C2CD2Q9Y426 696 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 DAAM1Q9Y4D1 1078 aa9.68□□□□□ -0.86
CSMD1-208ENST00000520561 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-208ENST00000520561 A0A0U1RQF3 1178 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 ZNF623O75123 536 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 TIMP1P01033 207 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CXCL10P02778 98 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 PFKMP08237 780 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RAG1P15918 1043 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RFX1P22670 979 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 AKAP5P24588 427 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 PON1P27169 355 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms