RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 ADAM7Q9H2U9 754 aa16.39■□□□□ 0.21
FBXO28-204ENST00000519894 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
FBXO28-204ENST00000519894 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
FBXO28-204ENST00000519894 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
FBXO28-204ENST00000519894 TRIP11Q15643 1979 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 TEX28O15482 410 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 DCXO43602 365 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 TADA2AO75478 443 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 BRD1O95696 1058 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 MCF2P10911 925 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 ALADP13716 330 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 DDIT3P35638 169 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 OSTNP61366 133 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 ITIH3Q06033 890 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 RARS2Q5T160 578 aaKnown RBP16.38■□□□□ 0.21
FBXO28-204ENST00000519894 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 ALKAL1Q6UXT8 129 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 FEZF2Q8TBJ5 459 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 LARP4BQ92615 738 aaKnown RBP16.38■□□□□ 0.21
FBXO28-204ENST00000519894 KCNN1Q92952 543 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 RPGRIP1Q96KN7 1286 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 PPP1R10Q96QC0 940 aaKnown RBP16.38■□□□□ 0.21
FBXO28-204ENST00000519894 LRFN3Q9BTN0 628 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
FBXO28-204ENST00000519894 DZANK1Q9NVP4 752 aa16.38■□□□□ 0.21
FBXO28-204ENST00000519894 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
FBXO28-204ENST00000519894 FAM86C2PA6NEL3 165 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 GPR37L1O60883 481 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 KIF4AO95239 1232 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 WEE2P0C1S8 567 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 IGFBP6P24592 240 aaPredicted RBP16.37■□□□□ 0.21
FBXO28-204ENST00000519894 ZNF131P52739 623 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 STRN3Q13033 797 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 SLC39A14Q15043 492 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 TMEM31Q5JXX7 168 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 KIAA1841Q6NSI8 718 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 CES5AQ6NT32 575 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 HAUS6Q7Z4H7 955 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 HASPINQ8TF76 798 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 FBXL18Q96ME1 805 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 TCHPQ9BT92 498 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 MUTYHQ9UIF7 546 aa16.37■□□□□ 0.21
FBXO28-204ENST00000519894 MORC2Q9Y6X9 1032 aaPredicted RBP16.37■□□□□ 0.21
FBXO28-204ENST00000519894 SMIM28A0A1B0GU29 152 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
FBXO28-204ENST00000519894 TOM1L1O75674 476 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 FAM13AO94988 1023 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 YARSP54577 528 aaKnown RBP16.36■□□□□ 0.21
FBXO28-204ENST00000519894 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
FBXO28-204ENST00000519894 CD300LGQ6UXG3 332 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 ZPBP2Q6X784 338 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 RIN2Q8WYP3 895 aaPredicted RBP16.36■□□□□ 0.21
FBXO28-204ENST00000519894 ZMAT2Q96NC0 199 aaKnown RBP16.36■□□□□ 0.21
FBXO28-204ENST00000519894 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 FIZ1Q96SL8 496 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 HAPLN2Q9GZV7 340 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 CCDC39Q9UFE4 941 aa16.36■□□□□ 0.21
FBXO28-204ENST00000519894 PLXNA3P51805 1871 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 H0YCG3 227 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 TRAK2O60296 914 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 ADH1AP07327 375 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 COL9A1P20849 921 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 MTHFRP42898 656 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 NASPP49321 788 aaPredicted RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 SOX4Q06945 474 aaPredicted RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 SEZ6Q53EL9 994 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 RTP2Q5QGT7 225 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 PRSS55Q6UWB4 352 aaPredicted RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 TMC5Q6UXY8 1006 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 SNX27Q96L92 541 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 RIPOR3Q96MK2 946 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 NECTIN4Q96NY8 510 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 SFXN1Q9H9B4 322 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 PARVGQ9HBI0 331 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 GOLGA2P5Q9HBQ8 144 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
FBXO28-204ENST00000519894 FNIP2Q9P278 1114 aa16.35■□□□□ 0.21
FBXO28-204ENST00000519894 SF3B1O75533 1304 aaKnown RBP eCLIP16.35■□□□□ 0.219e-7■■■■■ 57.4
FBXO28-204ENST00000519894 TMEM189-UBE2V1I3L0A0 370 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 GLUD1P00367 558 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 RPL17P18621 184 aaKnown RBP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 CLCNKBP51801 687 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 MCL1Q07820 350 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 UPP1Q16831 310 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 ATAT1Q5SQI0 421 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms