RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 PNMA8AQ86V59 439 aaPredicted RBP9.06□□□□□ -0.96
HMGB4-203ENST00000519684 RASGEF1CQ8N431 466 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 UBL4BQ8N7F7 174 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 TATDN2Q93075 761 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 ZBTB45Q96K62 511 aaPredicted RBP9.06□□□□□ -0.96
HMGB4-203ENST00000519684 TCHPQ9BT92 498 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 R3HDMLQ9H3Y0 253 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 SMARCAD1Q9H4L7 1026 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 TAF1DQ9H5J8 278 aaPredicted RBP9.06□□□□□ -0.96
HMGB4-203ENST00000519684 MED4Q9NPJ6 270 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 HPCAL4Q9UM19 191 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
HMGB4-203ENST00000519684 TMEM110-MUSTN1A8MSY1 372 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 MIF4GDA9UHW6 222 aaKnown RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 C4BPAP04003 597 aaKnown RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 PRKCBP05771 671 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 SRGAP2CP0DJJ0 459 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 MYBL2P10244 700 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 DMTNQ08495 405 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 LAMTOR4Q0VGL1 99 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 PLCB4Q15147 1175 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 HSDL1Q3SXM5 330 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 TDRD10Q5VZ19 366 aaKnown RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 PAXIP1Q6ZW49 1069 aaPredicted RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF771Q7L3S4 317 aaPredicted RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 GPRC5AQ8NFJ5 357 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 FAM71BQ8TC56 605 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 MORC4Q8TE76 937 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 SCFD2Q8WU76 684 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF653Q96CK0 615 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 PCDHB18PQ96TA0 734 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 HINFPQ9BQA5 517 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 IMPG2Q9BZV3 1241 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF408Q9H9D4 720 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 EPB41L5Q9HCM4 733 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ZNFX1Q9P2E3 1918 aaKnown RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 PLXNB2O15031 1838 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 GOLGA6L10A0A0M3HER8 536 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 UNCXA6NJT0 531 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 H3BQF6 201 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 CETPP11597 493 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 GJA5P36382 358 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 AP3M2P53677 418 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 NNTQ13423 1086 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 MAPK6Q16659 721 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 CRELD2Q6UXH1 353 aaPredicted RBP9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF677Q86XU0 584 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 CCDC26Q8TAB7 109 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 IFT81Q8WYA0 676 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 GDAP1L1Q96MZ0 367 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 AP1M1Q9BXS5 423 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 HAPLN2Q9GZV7 340 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 CARD9Q9H257 536 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 GDF3Q9NR23 364 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 COG5Q9UP83 839 aa9.05□□□□□ -0.96
HMGB4-203ENST00000519684 ADGRA2Q96PE1 1338 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 DDX3YO15523 660 aaKnown RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RAD51CO43502 376 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 HBP1O60381 514 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 TOM1L1O75674 476 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 MTA2O94776 668 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CYP1A2P05177 515 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 POTEJP0CG39 1038 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CYP2C8P10632 490 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 TBXAS1P24557 533 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 AARSP49588 968 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 DRP2Q13474 957 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 MESDQ14696 234 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 SURF1Q15526 300 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CLEC16AQ2KHT3 1053 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CDCA2Q69YH5 1023 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ACAD10Q6JQN1 1059 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 LRRC71Q8N4P6 559 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RNF149Q8NC42 400 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF564Q8TBZ8 553 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CAVIN3Q969G5 261 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 NUP85Q9BW27 656 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 CCDC113Q9H0I3 377 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 SLITRK6Q9H5Y7 841 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ACP6Q9NPH0 428 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 UVRAGQ9P2Y5 699 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GTF3C4Q9UKN8 822 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 TTC7AQ9ULT0 858 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 PCDHB2Q9Y5E7 798 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ALG6Q9Y672 507 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 PLXNA1Q9UIW2 1896 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GOLGA6BA6NDN3 693 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GLI1P08151 1106 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ZBTB48P10074 688 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GRM1Q13255 1194 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms