RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 MCTP2Q6DN12 878 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 XRRA1Q6P2D8 792 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 LRRC55Q6ZSA7 311 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 RSPH3Q86UC2 560 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 IQCA1Q86XH1 822 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 COLGALT1Q8NBJ5 622 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 POMKQ9H5K3 350 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 KAT14Q9H8E8 782 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 ERVK-5Q9HDB9 667 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 ERAP1Q9NZ08 941 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 RTEL1Q9NZ71 1219 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 PCDHA2Q9Y5H9 948 aa6.9□□□□□ -1.3
PABPC1-207ENST00000518716 ATRXP46100 2492 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 RRN3P2A6NIE6 340 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 B4E1Z4 1266 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 MEIS2O14770 477 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 ZNF213O14771 459 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 PI15O43692 258 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 INSRRP14616 1297 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 AOC1P19801 751 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 ADMP35318 185 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 TCF7P36402 384 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-207ENST00000518716 NLRP12P59046 1061 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 FAM102BQ5T8I3 360 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 CCDC105Q8IYK2 499 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 SEPT1Q8WYJ6 367 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 MRPS27Q92552 414 aaKnown RBP6.89□□□□□ -1.31
PABPC1-207ENST00000518716 NECTIN4Q96NY8 510 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 PIGSQ96S52 555 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 CELF4Q9BZC1 486 aaKnown RBP6.89□□□□□ -1.31
PABPC1-207ENST00000518716 RGS18Q9NS28 235 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 TYW1Q9NV66 732 aaKnown RBP6.89□□□□□ -1.31
PABPC1-207ENST00000518716 DLL3Q9NYJ7 618 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 RCAN3Q9UKA8 241 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 ZMIZ1Q9ULJ6 1067 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 PCDHB12Q9Y5F1 795 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 TRPV2Q9Y5S1 764 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 CNOT1A5YKK6 2376 aaKnown RBP6.89□□□□□ -1.31
PABPC1-207ENST00000518716 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
PABPC1-207ENST00000518716 FANCMQ8IYD8 2048 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 SMIM35A0A1B0GVV1 85 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 KRT37O76014 449 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 ASGR2P07307 311 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 ITIH3Q06033 890 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TROAPQ12815 778 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 HYAL2Q12891 473 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TRAF1Q13077 416 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 DSC3Q14574 896 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 GRM4Q14833 912 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TMEM164Q5U3C3 297 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 SLC24A5Q71RS6 500 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 NME8Q8N427 588 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 MRPL43Q8N983 215 aaKnown RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 DTWD2Q8NBA8 298 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 FEZF2Q8TBJ5 459 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 GPRASP2Q96D09 838 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 CASD1Q96PB1 797 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 FAM49AQ9H0Q0 323 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 SMARCAD1Q9H4L7 1026 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 ELAC1Q9H777 363 aaKnown RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
PABPC1-207ENST00000518716 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 PCDHB7Q9Y5E2 793 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 UBIAD1Q9Y5Z9 338 aa6.88□□□□□ -1.31
PABPC1-207ENST00000518716 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 LAMA4Q16363 1823 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 IGKV6D-21A0A0A0MT36 114 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 C2orf71A6NGG8 1288 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 TBKBP1A7MCY6 615 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 MAFGO15525 162 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
PABPC1-207ENST00000518716 CLASP2O75122 1294 aaKnown RBP6.87□□□□□ -1.31
PABPC1-207ENST00000518716 PTMAP06454 111 aaKnown RBP6.87□□□□□ -1.31
PABPC1-207ENST00000518716 SRGAP2BP0DMP2 458 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 SDSP20132 328 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 SP100P23497 879 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-207ENST00000518716 MARK3P27448 753 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 SP4Q02446 784 aa6.87□□□□□ -1.31
PABPC1-207ENST00000518716 TMEM62Q0P6H9 643 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms