RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ANKRD33Q7Z3H0 272 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 USP37Q86T82 979 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
PABPC1-203ENST00000517921 TMEM117Q9H0C3 514 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 PDE11AQ9HCR9 933 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 ST3GAL5Q9UNP4 418 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.47□□□□□ -0.57
PABPC1-203ENST00000517921 PTPRSQ13332 1948 aa11.47□□□□□ -0.57
PABPC1-203ENST00000517921 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 P4HA2O15460 535 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 STX10O60499 249 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 MFAP3LO75121 409 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 NOL4O94818 638 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 CLTAP09496 248 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 PON1P27169 355 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 CD52P31358 61 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 GRM5P41594 1212 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 FXR1P51114 621 aaKnown RBP eCLIP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 PAK2Q13177 524 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 KYAT1Q16773 422 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 TRIM60Q495X7 471 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 GBP6Q6ZN66 633 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 APBB1IPQ7Z5R6 666 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 PPFIBP1Q86W92 1011 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 EFCAB13Q8IY85 973 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 TC2NQ8N9U0 490 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 CCDC150Q8NCX0 1101 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 ZNF516Q92618 1163 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 PCMTD1Q96MG8 357 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 FNBP1Q96RU3 617 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 GANQ9H2C0 597 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 TMX1Q9H3N1 280 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 NXF3Q9H4D5 531 aaKnown RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 TMEM8AQ9HCN3 771 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 SIX2Q9NPC8 291 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 FAM207AQ9NSI2 230 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 PADI3Q9ULW8 664 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-203ENST00000517921 SQORQ9Y6N5 450 aa11.46□□□□□ -0.57
PABPC1-203ENST00000517921 TTC26A0AVF1 554 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 GPR182O15218 404 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TLR3O15455 904 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 IL18RAPO95256 599 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SLC34A2O95436 690 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 ACTN1P12814 892 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SELPP16109 830 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TNNI1P19237 187 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TRIM21P19474 475 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SLC9A1P19634 815 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 CASP14P31944 242 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 ADKP55263 362 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 APBA1Q02410 837 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 NFX1Q12986 1120 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 BFSP2Q13515 415 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SURF1Q15526 300 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 KRT39Q6A163 491 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TRIM65Q6PJ69 517 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 WDR49Q8IV35 697 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 USP38Q8NB14 1042 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 LMO3Q8TAP4 145 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 IQCDQ96DY2 449 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 NUP58Q9BVL2 599 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 CCDC94Q9BW85 323 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
PABPC1-203ENST00000517921 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 CAPN11Q9UMQ6 739 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 COQ4Q9Y3A0 265 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 MYH10P35580 1976 aa11.45□□□□□ -0.58
PABPC1-203ENST00000517921 TSC2P49815 1807 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 UMODL1Q5DID0 1318 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 A0A1W2PQJ5 194 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 LACTBL1A8MY62 500 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 AKR1B15C9JRZ8 316 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 MGEA5O60502 916 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 RECQL4O94761 1208 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 C4BPAP04003 597 aaKnown RBP11.44□□□□□ -0.58
PABPC1-203ENST00000517921 NFICP08651 508 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TPM1P09493 284 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 TLE2Q04725 743 aa11.44□□□□□ -0.58
PABPC1-203ENST00000517921 FAAP100Q0VG06 881 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms