RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ECHDC2Q86YB7 292 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 ELOA2Q8IYF1 753 aaPredicted RBP8.18□□□□□ -1.1
PVT1-206ENST00000517838 SIX5Q8N196 739 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 VPS52Q8N1B4 723 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 TRIML1Q8N9V2 468 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 MLKLQ8NB16 471 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 CCDC150Q8NCX0 1101 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 AUTS2Q8WXX7 1259 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 EPSTI1Q96J88 318 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 SEMA4AQ9H3S1 761 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 AGO4Q9HCK5 861 aaKnown RBP8.18□□□□□ -1.1
PVT1-206ENST00000517838 DLL3Q9NYJ7 618 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 DUSP12Q9UNI6 340 aa8.18□□□□□ -1.1
PVT1-206ENST00000517838 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
PVT1-206ENST00000517838 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 MEIS1O00470 390 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 WNT7AO00755 349 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 NARSO43776 548 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 SLFN14P0C7P3 912 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 UBA7P41226 1012 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 RPIAP49247 311 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ALDH7A1P49419 539 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 BCAR1P56945 870 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 FANCCQ00597 558 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 CEP55Q53EZ4 464 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ZNF484Q5JVG2 852 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 RRAGBQ5VZM2 374 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 SWSAP1Q6NVH7 229 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 USP49Q70CQ1 688 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 OTOP3Q7RTS5 596 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 NEK8Q86SG6 692 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 GPR149Q86SP6 731 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ZNF598Q86UK7 904 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 CCDC60Q8IWA6 550 aaPredicted RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 ABI1Q8IZP0 508 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 C17orf53Q8N3J3 647 aaPredicted RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 RNF169Q8NCN4 708 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 RIN2Q8WYP3 895 aaPredicted RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 ACSF2Q96CM8 615 aaPredicted RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 PAGE5Q96GU1 130 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 CDK5RAP3Q96JB5 506 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 XPO4Q9C0E2 1151 aaKnown RBP8.17□□□□□ -1.1
PVT1-206ENST00000517838 ZBP1Q9H171 429 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ADAMTS10Q9H324 1103 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 DZANK1Q9NVP4 752 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 RMND1Q9NWS8 449 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 PYCARDQ9ULZ3 195 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 IRAK3Q9Y616 596 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
PVT1-206ENST00000517838 ESYT2A0FGR8 921 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 DDX39AO00148 427 aaKnown RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 LAD1O00515 517 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 BACH1O14867 736 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 DHX15O43143 795 aaKnown RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 N4BP1O75113 896 aaKnown RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 TPM2P07951 284 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 COL1A2P08123 1366 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 CTSAP10619 480 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 ZSCAN20P17040 1043 aaPredicted RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 CA8P35219 290 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 UBASH3AP57075 661 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 NLRP11P59045 1033 aaKnown RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 STIM1Q13586 685 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.16e-11■■■■□ 21.2
PVT1-206ENST00000517838 CALCRLQ16602 461 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 QPCTQ16769 361 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 FAM160B1Q5W0V3 765 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 CABP7Q86V35 215 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 DCLK2Q8N568 766 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 METTL13Q8N6R0 699 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 ANKRD20A12PQ8NF67 263 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 RSAD2Q8WXG1 361 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 IGSF21Q96ID5 467 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 ZMYND12Q9H0C1 365 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 KCNF1Q9H3M0 494 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 ZNF302Q9NR11 478 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 IMPACTQ9P2X3 320 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 WNT16Q9UBV4 365 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 KMT2BQ9UMN6 2715 aaPredicted RBP8.16□□□□□ -1.1
PVT1-206ENST00000517838 CTNND2Q9UQB3 1225 aa8.16□□□□□ -1.1
PVT1-206ENST00000517838 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 A0A087X0B3 334 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 CFAP99D6REC4 459 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 ADAMTS3O15072 1205 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 LILRB3O75022 631 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 GALTP07902 379 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 FGFR4P22455 802 aa8.15□□□□□ -1.1
PVT1-206ENST00000517838 SFPQP23246 707 aaKnown RBP eCLIP8.15□□□□□ -1.13e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms