RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 USP15Q9Y4E8 981 aaPredicted RBP15.44■□□□□ 0.06
PDGFRB-202ENST00000517488 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 H0YCG3 227 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 TADA2AO75478 443 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 KIF4AO95239 1232 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 URODP06132 367 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 SRGAP2BP0DMP2 458 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 EPCAMP16422 314 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 IGFBP6P24592 240 aaPredicted RBP15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 STAT6P42226 847 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 YARSP54577 528 aaKnown RBP15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 NOLC1Q14978 699 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 XKR4Q5GH76 650 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 KIAA0319Q5VV43 1072 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 SV2BQ7L1I2 683 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 ADHFE1Q8IWW8 467 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 PDILTQ8N807 584 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 HASPINQ8TF76 798 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 DDX12PQ92771 950 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 BICD1Q96G01 975 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 ACAP3Q96P50 834 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 CHST7Q9NS84 486 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 PRKAG3Q9UGI9 489 aa15.43■□□□□ 0.06
PDGFRB-202ENST00000517488 CLDN3O15551 220 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 SSTR3P32745 418 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 GLUD2P49448 558 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 DSG1Q02413 1049 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 MCL1Q07820 350 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 AXDND1Q5T1B0 1012 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 KANK3Q6NY19 840 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 SHC4Q6S5L8 630 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 C12orf76Q8N812 135 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 SUSD6Q92537 303 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 DNAJC19Q96DA6 116 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 SNX27Q96L92 541 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 EMILIN2Q9BXX0 1053 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 TOPORSQ9NS56 1045 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 CDH22Q9UJ99 828 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
PDGFRB-202ENST00000517488 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 TEX28O15482 410 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 CUTAO60888 179 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 PIGRP01833 764 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 KCNE1P15382 129 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 KLRC2P26717 231 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 LIG4P49917 911 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 GTF2BQ00403 316 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 SOX4Q06945 474 aaPredicted RBP15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 SLC10A6Q3KNW5 377 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 USP41Q3LFD5 358 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 ZC2HC1CQ53FD0 456 aaPredicted RBP15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 SLC39A4Q6P5W5 647 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 FEZF2Q8TBJ5 459 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 GOLGA2P5Q9HBQ8 144 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 RXFP1Q9HBX9 757 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 SSX2IPQ9Y2D8 614 aa15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 SF3B1O75533 1304 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDGFRB-202ENST00000517488 HNRNPDLO14979 420 aaKnown RBP15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 SCP2P22307 547 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 CLCN4P51793 760 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 CLCNKBP51801 687 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 E2F4Q16254 413 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 RTP2Q5QGT7 225 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 FAM171A1Q5VUB5 890 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 CD300LGQ6UXG3 332 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 ZNF720Q7Z2F6 126 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 MAP4K3Q8IVH8 894 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 KCNG4Q8TDN1 519 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 RIN2Q8WYP3 895 aaPredicted RBP15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 STAMQ92783 540 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 C18orf25Q96B23 403 aaPredicted RBP15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 CHAMP1Q96JM3 812 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 FBXL18Q96ME1 805 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 IKZF4Q9H2S9 585 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 TBC1D7Q9P0N9 293 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 CNTN3Q9P232 1028 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
PDGFRB-202ENST00000517488 TISP43B9A030 160 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 ANKRD63C9JTQ0 380 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 FAM189A1O60320 539 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 B3GAT3O94766 335 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 CLTAP09496 248 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 WEE2P0C1S8 567 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 CXCL8P10145 99 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 RPL17P18621 184 aaKnown RBP15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 TNFSF9P41273 254 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 ME1P48163 572 aa15.39■□□□□ 0.05
PDGFRB-202ENST00000517488 UPP1Q16831 310 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms