RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 NKX3-2P78367 333 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 BMS1Q14692 1282 aaKnown RBP21.72■■□□□ 1.07
TRIO-223ENST00000515710 SEZ6Q53EL9 994 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 WDR49Q8IV35 697 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 CDT1Q9H211 546 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 TRIM10Q9UDY6 481 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 SEPT4O43236 478 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 CYP2C9P11712 490 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 KYAT1Q16773 422 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 WDR44Q5JSH3 913 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 EEF1DP3Q658K8 133 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 PPM1KQ8N3J5 372 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 HELQQ8TDG4 1101 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 PPP1R16BQ96T49 567 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 GCOM2Q9BZD3 368 aaPredicted RBP21.72■■□□□ 1.07
TRIO-223ENST00000515710 L2HGDHQ9H9P8 463 aa21.72■■□□□ 1.07
TRIO-223ENST00000515710 HLA-DRAP01903 254 aa21.71■■□□□ 1.07
TRIO-223ENST00000515710 C6orf222P0C671 652 aaPredicted RBP21.71■■□□□ 1.07
TRIO-223ENST00000515710 PNMA6AP0CW24 399 aaPredicted RBP21.71■■□□□ 1.07
TRIO-223ENST00000515710 TDRD10Q5VZ19 366 aaKnown RBP21.71■■□□□ 1.07
TRIO-223ENST00000515710 LMBRD2Q68DH5 695 aaPredicted RBP21.71■■□□□ 1.07
TRIO-223ENST00000515710 ZNF710Q8N1W2 664 aa21.71■■□□□ 1.07
TRIO-223ENST00000515710 SLC35F6Q8N357 371 aa21.71■■□□□ 1.07
TRIO-223ENST00000515710 ADAMTS10Q9H324 1103 aa21.71■■□□□ 1.07
TRIO-223ENST00000515710 C17orf102A2RUQ5 167 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 FANCGO15287 622 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 GCNT1Q02742 428 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 CACNB2Q08289 660 aaPredicted RBP21.7■■□□□ 1.07
TRIO-223ENST00000515710 BIRC3Q13489 604 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 PCBP1Q15365 356 aaKnown RBP eCLIP21.7■■□□□ 1.07
TRIO-223ENST00000515710 THNSL1Q8IYQ7 743 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 KREMEN1Q96MU8 473 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 MTG1Q9BT17 334 aaPredicted RBP21.7■■□□□ 1.07
TRIO-223ENST00000515710 RNF186Q9NXI6 227 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 TFR2Q9UP52 801 aa21.7■■□□□ 1.07
TRIO-223ENST00000515710 ATP8B3O60423 1300 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 PTPRJQ12913 1337 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 GPR32O75388 356 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 URI1O94763 535 aaPredicted RBP21.7■■□□□ 1.06
TRIO-223ENST00000515710 ERLIN2O94905 339 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 RARBP10826 455 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 GTF2F1P35269 517 aaKnown RBP eCLIP21.7■■□□□ 1.06
TRIO-223ENST00000515710 PIK3CAP42336 1068 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 NAB2Q15742 525 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 SHC3Q92529 594 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 SECISBP2LQ93073 1101 aaKnown RBP21.7■■□□□ 1.06
TRIO-223ENST00000515710 FAM49AQ9H0Q0 323 aaPredicted RBP21.7■■□□□ 1.06
TRIO-223ENST00000515710 PDZD7Q9H5P4 517 aa21.7■■□□□ 1.06
TRIO-223ENST00000515710 TSPAN1O60635 241 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 TRPA1O75762 1119 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 IL18RAPO95256 599 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 ARF4P18085 180 aaPredicted RBP21.69■■□□□ 1.06
TRIO-223ENST00000515710 HOXC8P31273 242 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 GNASQ5JWF2 1037 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 FAM71AQ8IYT1 594 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 NME8Q8N427 588 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 C7orf31Q8N865 590 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 TATDN2Q93075 761 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
TRIO-223ENST00000515710 C1orf112Q9NSG2 853 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 SRRDQ9UH36 339 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 NAGPAQ9UK23 515 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 PRDM4Q9UKN5 801 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 KAT6AQ92794 2004 aa21.69■■□□□ 1.06
TRIO-223ENST00000515710 UQCRHLA0A096LP55 91 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 CTAGE9A4FU28 777 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 GPR25O00155 361 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 B4GALT4O60513 344 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 PHACTR2O75167 634 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 CSDE1O75534 798 aaKnown RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 VNN1O95497 513 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 UQCRHP07919 91 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 CLTAP09496 248 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 NCBP1Q09161 790 aaKnown RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 TUBB2AQ13885 445 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 HIC1Q14526 733 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 DUOXA2Q1HG44 320 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 KIZQ2M2Z5 673 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 ALKBH5Q6P6C2 394 aaKnown RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 OR5B17Q8NGF7 314 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 SLC30A5Q8TAD4 765 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 KAT5Q92993 513 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 SYT11Q9BT88 431 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 TUBB2BQ9BVA1 445 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 HDAC6Q9UBN7 1215 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 NENFQ9UMX5 172 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 A0A1B0GUA9 196 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 MYADML2A6NDP7 307 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 CAP1Q01518 475 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 RUFY4Q6ZNE9 571 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 APBB1IPQ7Z5R6 666 aaPredicted RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 CDR2LQ86X02 465 aaPredicted RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 RNF10Q8N5U6 811 aaKnown RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 FAM212AQ96EL1 285 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 CPB2Q96IY4 423 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 NAPGQ99747 312 aaPredicted RBP21.68■■□□□ 1.06
TRIO-223ENST00000515710 ADPGKQ9BRR6 497 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 DUSP10Q9Y6W6 482 aa21.68■■□□□ 1.06
TRIO-223ENST00000515710 DDX3XO00571 662 aaKnown RBP eCLIP21.67■■□□□ 1.06
TRIO-223ENST00000515710 TREHO43280 583 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms