RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 GLYCTKQ8IVS8 523 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 RPGRIP1Q96KN7 1286 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 EMILIN2Q9BXX0 1053 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 HAPLN2Q9GZV7 340 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 LARSQ9P2J5 1176 aaKnown RBP14.32□□□□□ -0.12
CDK7-213ENST00000515391 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 ODF2LQ9ULJ1 636 aa14.32□□□□□ -0.12
CDK7-213ENST00000515391 MYH15Q9Y2K3 1946 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 A0A087X0B3 334 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 SMIM28A0A1B0GU29 152 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 FAM86C2PA6NEL3 165 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 K7ENM7 598 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 TEX28O15482 410 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 TRAK2O60296 914 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 MCF2P10911 925 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 HOXB8P17481 243 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 RPL17P18621 184 aaKnown RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 NMT1P30419 496 aaKnown RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 CLCN4P51793 760 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 DSG1Q02413 1049 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 SOX4Q06945 474 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 PKP1Q13835 747 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 CBX2Q14781 532 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 STK38Q15208 465 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 RRAGBQ5VZM2 374 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 APBB1IPQ7Z5R6 666 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 KRI1Q8N9T8 703 aaKnown RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 LINC00301Q8NCQ3 95 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 RIN2Q8WYP3 895 aaPredicted RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 ZMAT2Q96NC0 199 aaKnown RBP14.31□□□□□ -0.12
CDK7-213ENST00000515391 ACAP3Q96P50 834 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 CHST7Q9NS84 486 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 PLXNA3P51805 1871 aa14.31□□□□□ -0.12
CDK7-213ENST00000515391 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 TOM1L1O75674 476 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 MATR3P43243 847 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDK7-213ENST00000515391 CLCNKBP51801 687 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 ZNF131P52739 623 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 USP41Q3LFD5 358 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 TPRNQ4KMQ1 711 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 RTP2Q5QGT7 225 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 CD300LGQ6UXG3 332 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 ALKAL1Q6UXT8 129 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 CEP57Q86XR8 500 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 PALB2Q86YC2 1186 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 PDILTQ8N807 584 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 BICD1Q96G01 975 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 SNX27Q96L92 541 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 FBXL18Q96ME1 805 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 ZNF396Q96N95 335 aaPredicted RBP14.3□□□□□ -0.12
CDK7-213ENST00000515391 FIZ1Q96SL8 496 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 POP1Q99575 1024 aaKnown RBP14.3□□□□□ -0.12
CDK7-213ENST00000515391 PHF7Q9BWX1 381 aaPredicted RBP14.3□□□□□ -0.12
CDK7-213ENST00000515391 ADAM7Q9H2U9 754 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 POMKQ9H5K3 350 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 RXFP1Q9HBX9 757 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 C11orf16Q9NQ32 467 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 STK17AQ9UEE5 414 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 DAXXQ9UER7 740 aaPredicted RBP14.3□□□□□ -0.12
CDK7-213ENST00000515391 STK39Q9UEW8 545 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 MUTYHQ9UIF7 546 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 KCNG1Q9UIX4 513 aa14.3□□□□□ -0.12
CDK7-213ENST00000515391 MYMKA6NI61 221 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 LOC730098B7Z3J9 87 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 I3L4J1 428 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 SPTLC2O15270 562 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
CDK7-213ENST00000515391 BRD1O95696 1058 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 F13A1P00488 732 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
CDK7-213ENST00000515391 TXLNAP40222 546 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 BRCC3P46736 316 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 SPAG1Q07617 926 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 NOLC1Q14978 699 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK7-213ENST00000515391 SLC10A6Q3KNW5 377 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 ZC2HC1CQ53FD0 456 aaPredicted RBP14.29□□□□□ -0.12
CDK7-213ENST00000515391 XKR4Q5GH76 650 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 ZBTB41Q5SVQ8 909 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 CES5AQ6NT32 575 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 ZPBP2Q6X784 338 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 SFR1Q86XK3 245 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 C18orf25Q96B23 403 aaPredicted RBP14.29□□□□□ -0.12
CDK7-213ENST00000515391 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 TOPORSQ9NS56 1045 aaPredicted RBP14.29□□□□□ -0.12
CDK7-213ENST00000515391 DZANK1Q9NVP4 752 aa14.29□□□□□ -0.12
CDK7-213ENST00000515391 RAPGEFL1Q9UHV5 662 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms