RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 HSP90AA1P07900 732 aaKnown RBP26.84■■□□□ 1.89
SNF8-213ENST00000514929 PROZP22891 400 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 MTHFRP42898 656 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 USP49Q70CQ1 688 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 MYCT1Q8N699 235 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 RIPOR3Q96MK2 946 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 USP28Q96RU2 1077 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 RXFP1Q9HBX9 757 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 ANKFY1Q9P2R3 1169 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 MUTYHQ9UIF7 546 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 FAM86C2PA6NEL3 165 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 TXLNAP40222 546 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 NCKAP1LP55160 1127 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 KANK3Q6NY19 840 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 ZPBP2Q6X784 338 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 HAUS6Q7Z4H7 955 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 RIN2Q8WYP3 895 aaPredicted RBP26.83■■□□□ 1.89
SNF8-213ENST00000514929 BICD1Q96G01 975 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 ZBTB45Q96K62 511 aaPredicted RBP26.83■■□□□ 1.89
SNF8-213ENST00000514929 CLIC6Q96NY7 704 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 ACAP3Q96P50 834 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 PPP1R10Q96QC0 940 aaKnown RBP26.83■■□□□ 1.89
SNF8-213ENST00000514929 LRFN3Q9BTN0 628 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 ZHX3Q9H4I2 956 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 SFXN1Q9H9B4 322 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 PARVGQ9HBI0 331 aa26.83■■□□□ 1.89
SNF8-213ENST00000514929 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.83■■□□□ 1.89
SNF8-213ENST00000514929 ABLIM1O14639 778 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 GPR37L1O60883 481 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 TBCAO75347 108 aaKnown RBP26.82■■□□□ 1.88
SNF8-213ENST00000514929 BRD1O95696 1058 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 WEE2P0C1S8 567 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 DDIT3P35638 169 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 MATR3P43243 847 aaKnown RBP eCLIP26.82■■□□□ 1.88
SNF8-213ENST00000514929 ATAT1Q5SQI0 421 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 TMC5Q6UXY8 1006 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 GPR65Q8IYL9 337 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 POMKQ9H5K3 350 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 TSHZ2Q9NRE2 1034 aa26.82■■□□□ 1.88
SNF8-213ENST00000514929 SMIM28A0A1B0GU29 152 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 GLUD1P00367 558 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 COL9A1P20849 921 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 SP100P23497 879 aaPredicted RBP26.81■■□□□ 1.88
SNF8-213ENST00000514929 NOLC1Q14978 699 aaKnown RBP eCLIP26.81■■□□□ 1.88
SNF8-213ENST00000514929 SLC39A14Q15043 492 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 FAM171A1Q5VUB5 890 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 ELMSAN1Q6PJG2 1045 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 C11orf16Q9NQ32 467 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 MAN1C1Q9NR34 630 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 DPP7Q9UHL4 492 aa26.81■■□□□ 1.88
SNF8-213ENST00000514929 K7ENM7 598 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 CLDN3O15551 220 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 ZNF131P52739 623 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 CREMQ03060 361 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 ELAVL2Q12926 359 aaKnown RBP26.8■■□□□ 1.88
SNF8-213ENST00000514929 HERC4Q5GLZ8 1057 aaPredicted RBP26.8■■□□□ 1.88
SNF8-213ENST00000514929 RRAGBQ5VZM2 374 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 CEP57Q86XR8 500 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 KRI1Q8N9T8 703 aaKnown RBP26.8■■□□□ 1.88
SNF8-213ENST00000514929 SNX27Q96L92 541 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 UROC1Q96N76 676 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 FNIP2Q9P278 1114 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 STK17AQ9UEE5 414 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 NR2E1Q9Y466 385 aa26.8■■□□□ 1.88
SNF8-213ENST00000514929 TRAK2O60296 914 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 B3GAT3O94766 335 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 SCP2P22307 547 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 CLCNKBP51801 687 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 STK38Q15208 465 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 XKR4Q5GH76 650 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 RTP2Q5QGT7 225 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 DCLRE1AQ6PJP8 1040 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 ALKAL1Q6UXT8 129 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 PALB2Q86YC2 1186 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 GLYCTKQ8IVS8 523 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 TTPALQ9BTX7 342 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 SLC38A7Q9NVC3 462 aa26.79■■□□□ 1.88
SNF8-213ENST00000514929 MORC2Q9Y6X9 1032 aaPredicted RBP26.79■■□□□ 1.88
SNF8-213ENST00000514929 LIG4P49917 911 aa26.78■■□□□ 1.88
SNF8-213ENST00000514929 MCL1Q07820 350 aa26.78■■□□□ 1.88
SNF8-213ENST00000514929 SEZ6Q53EL9 994 aa26.78■■□□□ 1.88
SNF8-213ENST00000514929 PRSS55Q6UWB4 352 aaPredicted RBP26.78■■□□□ 1.88
SNF8-213ENST00000514929 GOLGA2P5Q9HBQ8 144 aa26.78■■□□□ 1.88
SNF8-213ENST00000514929 TBX20Q9UMR3 447 aa26.78■■□□□ 1.88
SNF8-213ENST00000514929 TRIP11Q15643 1979 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 PLXNA3P51805 1871 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 TMEM189-UBE2V1I3L0A0 370 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 MYBP10242 640 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 RPL17P18621 184 aaKnown RBP26.77■■□□□ 1.88
SNF8-213ENST00000514929 NASPP49321 788 aaPredicted RBP26.77■■□□□ 1.88
SNF8-213ENST00000514929 UPP1Q16831 310 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 FOXD4L5Q5VV16 416 aaPredicted RBP26.77■■□□□ 1.88
SNF8-213ENST00000514929 GPR149Q86SP6 731 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 FOXD4L4Q8WXT5 416 aaPredicted RBP26.77■■□□□ 1.88
SNF8-213ENST00000514929 KCNN1Q92952 543 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 ZNF396Q96N95 335 aaPredicted RBP26.77■■□□□ 1.88
SNF8-213ENST00000514929 CNTN3Q9P232 1028 aa26.77■■□□□ 1.88
SNF8-213ENST00000514929 HNRNPDLO14979 420 aaKnown RBP26.76■■□□□ 1.87
SNF8-213ENST00000514929 SPATA31D3P0C874 917 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 KCNE1P15382 129 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms