RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PQLC1Q8N2U9 271 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 DCBLD1Q8N8Z6 715 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 KYQ8NBH2 561 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 KBTBD7Q8WVZ9 684 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 CASKIN2Q8WXE0 1202 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 TMEM41AQ96HV5 264 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 TTLL2Q9BWV7 592 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 TRIM54Q9BYV2 358 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 MRPL46Q9H2W6 279 aaKnown RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 ZNF287Q9HBT7 754 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 PNPLA8Q9NP80 782 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 TLR9Q9NR96 1032 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 FEZ2Q9UHY8 353 aaPredicted RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 PNMA2Q9UL42 364 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 F2RL2O00254 374 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 ADAMTS3O15072 1205 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 ADCY6O43306 1168 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 GPR32O75388 356 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 GASTP01350 101 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 DDCP20711 480 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 POLD1P28340 1107 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 CHKAP35790 457 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 FLT3LGP49771 235 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 STAT5BP51692 787 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 CDR1P51861 262 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 PDCD2Q16342 344 aaPredicted RBP6.26□□□□□ -1.41
RFC1-216ENST00000514572 ZNF827Q17R98 1081 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 PRR16Q569H4 304 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 ZFYVE27Q5T4F4 411 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 STK32CQ86UX6 486 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 IGDCC3Q8IVU1 814 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 TTLL6Q8N841 843 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 MAML1Q92585 1016 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 NMD3Q96D46 503 aaKnown RBP6.26□□□□□ -1.41
RFC1-216ENST00000514572 SCLT1Q96NL6 688 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 NOX5Q96PH1 765 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 NAP1L4Q99733 375 aaKnown RBP6.26□□□□□ -1.41
RFC1-216ENST00000514572 LANCL2Q9NS86 450 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 GPRC5DQ9NZD1 345 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.26□□□□□ -1.41
RFC1-216ENST00000514572 COL20A1Q9P218 1284 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 CPNE7Q9UBL6 633 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 MBD1Q9UIS9 605 aaPredicted RBP6.26□□□□□ -1.41
RFC1-216ENST00000514572 ANAPC4Q9UJX5 808 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 OGDHLQ9ULD0 1010 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 GPR52Q9Y2T5 361 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 PCDHGB2Q9Y5G2 931 aa6.26□□□□□ -1.41
RFC1-216ENST00000514572 NPHP1O15259 732 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 MTSS1O43312 755 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 PEX10O60683 326 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 ALDH1A2O94788 518 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 BRAFP15056 766 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 FPR1P21462 350 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 HSPA7P48741 367 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 MLLT6P55198 1093 aaPredicted RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 SESN2P58004 480 aaPredicted RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 CTXN1P60606 82 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 MPEG1Q2M385 716 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 SLC35G1Q2M3R5 365 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 FLYWCH1Q4VC44 716 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 ALFQ53S48 1182 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 RSPH3Q86UC2 560 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 LIX1LQ8IVB5 337 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 SH2D3CQ8N5H7 860 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 SPATA5Q8NB90 893 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 CCHCR1Q8TD31 782 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 BRIX1Q8TDN6 353 aaKnown RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 SUCLG2Q96I99 432 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 KATNBL1Q9H079 304 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 PIH1D1Q9NWS0 290 aaKnown RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 RGS17Q9UGC6 210 aaPredicted RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 CDC42EP3Q9UKI2 254 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 GTF2A1LQ9UNN4 478 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 CTDP1Q9Y5B0 961 aaPredicted RBP6.25□□□□□ -1.41
RFC1-216ENST00000514572 ATRNL1Q5VV63 1379 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 SCRIBQ14160 1630 aa6.25□□□□□ -1.41
RFC1-216ENST00000514572 ZCCHC6Q5VYS8 1495 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 MYOCOSA0A1B0GUC4 107 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 hCG_1642624A0A1W2PR95 340 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 ITGA10O75578 1167 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 MATN4O95460 622 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 PARP1P09874 1014 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 SRGNP10124 158 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 VEGFAP15692 232 aaPredicted RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 ZNF28P17035 718 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 NCKAP1LP55160 1127 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 SUMO3P55854 103 aaPredicted RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 SRSF3P84103 164 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 GADL1Q6ZQY3 521 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 LARP4Q71RC2 724 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFC1-216ENST00000514572 ZNF572Q7Z3I7 529 aaPredicted RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 ZSWIM9Q86XI8 627 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 GFM2Q969S9 779 aaKnown RBP6.24□□□□□ -1.41
RFC1-216ENST00000514572 UIMC1Q96RL1 719 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 BRIP1Q9BX63 1249 aa6.24□□□□□ -1.41
RFC1-216ENST00000514572 LDAHQ9H6V9 325 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms