RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RIN2Q8WYP3 895 aaPredicted RBP11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 KCNN1Q92952 543 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 ASIC4Q96FT7 647 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 PLIN2Q99541 437 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 DPP7Q9UHL4 492 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 SFI1A8K8P3 1242 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 TGM5O43548 720 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 RPL17P18621 184 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 PDCP20941 246 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 NCKAP1LP55160 1127 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 GRIN1Q05586 938 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 ELAVL2Q12926 359 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 ARSHQ5FYA8 562 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 LILRA6Q6PI73 481 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 ALKAL1Q6UXT8 129 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 CCDC149Q6ZUS6 474 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 ZNF707Q96C28 371 aaPredicted RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 FAM122AQ96E09 287 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 SNX27Q96L92 541 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 UROC1Q96N76 676 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 TTPALQ9BTX7 342 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 CCDC94Q9BW85 323 aaPredicted RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 PLEKHA4Q9H4M7 779 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 CNTN3Q9P232 1028 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 KCNG1Q9UIX4 513 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 ODF2LQ9ULJ1 636 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 SORCS3Q9UPU3 1222 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
HMGXB3-205ENST00000514469 CLUHO75153 1309 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 NPHP3-ACAD11A0A0J9YXS1 232 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 MEFVO15553 781 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 TOM1L1O75674 476 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 RFPL2O75678 378 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 PLCG1P19174 1290 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 UBA7P41226 1012 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 CLCNKBP51801 687 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 ZNF131P52739 623 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 SMTNP53814 917 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 STRN3Q13033 797 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 RESTQ13127 1097 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 PSMD5Q16401 504 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 UPP1Q16831 310 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 FAM171A1Q5VUB5 890 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 CD300LGQ6UXG3 332 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 PALB2Q86YC2 1186 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 C3orf58Q8NDZ4 430 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 CALML4Q96GE6 196 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 INTS4Q96HW7 963 aaKnown RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 KCNH6Q9H252 994 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 GOLGA2P5Q9HBQ8 144 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 BLOC1S4Q9NUP1 217 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 LARSQ9P2J5 1176 aaKnown RBP11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 FBXW11Q9UKB1 542 aa11.46□□□□□ -0.57
HMGXB3-205ENST00000514469 C2orf16Q68DN1 1984 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 H0YCG3 227 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 SPATA31D3P0C874 917 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 KCNE1P15382 129 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 SYT1P21579 422 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 FGFR3P22607 806 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 IGFBP6P24592 240 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 OSTNP61366 133 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 MCL1Q07820 350 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 NOLC1Q14978 699 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 PTPAQ15257 358 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 PDXDC1Q6P996 788 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 DCLRE1AQ6PJP8 1040 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 SPATA31D4Q6ZUB0 917 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 GPBP1Q86WP2 473 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 GLYCTKQ8IVS8 523 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 UBALD2Q8IYN6 164 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 RAD54LQ92698 747 aa11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 ZBTB45Q96K62 511 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 ZMAT2Q96NC0 199 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-205ENST00000514469 ACAP3Q96P50 834 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms