RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 MMGT1Q8N4V1 131 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 PRAMEP78395 509 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 HPS3Q969F9 1004 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ZFATQ9P243 1243 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 P4HA2O15460 535 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 GYPCP04921 128 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 TRAPPC11Q7Z392 1133 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 SNX19Q92543 992 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 RBM15Q96T37 977 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 WARS2Q9UGM6 360 aaKnown RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 PTPRUQ92729 1446 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 FLT1P17948 1338 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 STXBP3O00186 592 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 PID1Q7Z2X4 250 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 TMCC1O94876 653 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ANP32DO95626 131 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 PDHA1P08559 390 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 TRADDQ15628 312 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 AGGF1Q8N302 714 aaeCLIP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-210ENST00000512756 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
COL11A1-210ENST00000512756 SYCE1LA8MT33 242 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 CHN1P15882 459 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 HIC1Q14526 733 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 ZNF212Q9UDV6 495 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 ASB14A6NK59 587 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 PGM1P36871 562 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 SERPINB9P50453 376 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 STAT5BP51692 787 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 ANGPTL8Q6UXH0 198 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 LPAR1Q92633 364 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 SPAG6O75602 509 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 ADORA2BP29275 332 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 CDK17Q00537 523 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 CEP70Q8NHQ1 597 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 SLC26A7Q8TE54 656 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 XPO6Q96QU8 1125 aaKnown RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-210ENST00000512756 PRKCBP05771 671 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 NFIXQ14938 502 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 ASPSCR1Q9BZE9 553 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 SP110Q9HB58 689 aa13.16□□□□□ -0.3
COL11A1-210ENST00000512756 E5RI56 91 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 PSMD3O43242 534 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 BNIP3LO60238 219 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 HSD17B4P51659 736 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 CDC42EP1Q00587 391 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 P3H1Q32P28 736 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 EPAS1Q99814 870 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 OSBPL1AQ9BXW6 950 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 SNRNP35Q16560 246 aaKnown RBP13.15□□□□□ -0.3
COL11A1-210ENST00000512756 SGSM1Q2NKQ1 1148 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 MMP19Q99542 508 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
COL11A1-210ENST00000512756 FHOD1Q9Y613 1164 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms