RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SFNP31947 248 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 CCT6AP40227 531 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 AFMP43652 599 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 TPM4P67936 248 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 FAM189BP81408 668 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 MTMR1Q13613 665 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 LPAL2Q16609 132 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 DCLRE1AQ6PJP8 1040 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 NLRX1Q86UT6 975 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 CATSPER3Q86XQ3 398 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 GJA10Q969M2 543 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 TMEM169Q96HH4 297 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 PCYT2Q99447 389 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 ZNF577Q9BSK1 485 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 ZBP1Q9H171 429 aa11.53□□□□□ -0.56
PDLIM5-217ENST00000512274 SMIM35A0A1B0GVV1 85 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 GPR182O15218 404 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 MED24O75448 989 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 ZNF18P17022 549 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 JAK3P52333 1124 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 SLC12A3P55017 1021 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 BCAR1P56945 870 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 TSSK4Q6SA08 328 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 MTHFD1LQ6UB35 978 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 FAM228AQ86W67 206 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 NME8Q8N427 588 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 SYT2Q8N9I0 419 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 ERCC4Q92889 916 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 MYADMQ96S97 322 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 HSD3B7Q9H2F3 369 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 RWDD2AQ9UIY3 292 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 GMEB2Q9UKD1 530 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 RALGAPA1Q6GYQ0 2036 aa11.52□□□□□ -0.57
PDLIM5-217ENST00000512274 MYMKA6NI61 221 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 BIN1O00499 593 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 SLC30A4O14863 429 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 HOXA2O43364 376 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 SLITRK3O94933 977 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 KCNA2P16389 499 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 KLRC1P26715 233 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 KLRC2P26717 231 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 ALDH7A1P49419 539 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 DHX8Q14562 1220 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 ECM1Q16610 540 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 ZNF528Q3MIS6 628 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 ODR4Q5SWX8 454 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 SPATA1Q5VX52 437 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 KCNK18Q7Z418 384 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 DNAJC19Q96DA6 116 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 OSMRQ99650 979 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 MTF2Q9Y483 593 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 PCDHGA2Q9Y5H1 932 aa11.51□□□□□ -0.57
PDLIM5-217ENST00000512274 LRRC10BA6NIK2 292 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 EML1O00423 815 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 ADCY5O95622 1261 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 TPM3P06753 285 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 PLA2G4BP0C869 781 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 CTSAP10619 480 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 CYP11B2P19099 503 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 STIM1Q13586 685 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 DSC3Q14574 896 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 UBXN2BQ14CS0 331 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 N4BP2L1Q5TBK1 243 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 C4orf19Q8IY42 314 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 ZBTB44Q8NCP5 570 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 NETO1Q8TDF5 533 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 DDX12PQ92771 950 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 NACC1Q96RE7 527 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 TIPINQ9BVW5 301 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 BCO2Q9BYV7 579 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 UNC45AQ9H3U1 944 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 AZI2Q9H6S1 392 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 KIAA1024Q9UPX6 916 aa11.5□□□□□ -0.57
PDLIM5-217ENST00000512274 DOCK8Q8NF50 2099 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms