RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 CACNA1HO95180 2353 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 PTPDC1A2A3K4 754 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 LCHNA4D1U4 455 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 TSPY2A6NKD2 308 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 H3BNC9 293 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 H3BS24 57 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 RNF113AO15541 343 aaKnown RBP7.84□□□□□ -1.15
NR1I3-229ENST00000511748 GPAA1O43292 621 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 GH1P01241 217 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 FGRP09769 529 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 CKBP12277 381 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 IL9P15248 144 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 MCCP23508 829 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 KIR3DL1P43629 444 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 HTRA4P83105 476 aaPredicted RBP7.84□□□□□ -1.15
NR1I3-229ENST00000511748 HERC4Q5GLZ8 1057 aaPredicted RBP7.84□□□□□ -1.15
NR1I3-229ENST00000511748 MUM1L1Q5H9M0 696 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 UNC5AQ6ZN44 842 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 TAB3Q8N5C8 712 aaPredicted RBP7.84□□□□□ -1.15
NR1I3-229ENST00000511748 C7orf31Q8N865 590 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 IWS1Q96ST2 819 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 TM9SF2Q99805 663 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 LRRCC1Q9C099 1032 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 NAPBQ9H115 298 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 ECHDC1Q9NTX5 307 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 VAV3Q9UKW4 847 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 SNX11Q9Y5W9 270 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 MRVI1Q9Y6F6 885 aa7.84□□□□□ -1.15
NR1I3-229ENST00000511748 MICAL3Q7RTP6 2002 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 SHISA3A0PJX4 238 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 FSD2A1L4K1 749 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 C9IYK1 514 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 PRDM1O75626 825 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 WNT11O96014 354 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 RB1P06400 928 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 PCP11498 1178 aaKnown RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 GUCY2CP25092 1073 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 NOVP48745 357 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 DEFB103AP81534 67 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 SMAD2Q15796 467 aaKnown RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 KCNV1Q6PIU1 500 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 FAM43BQ6ZT52 329 aaPredicted RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 VSIG10LQ86VR7 867 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 PPFIBP1Q86W92 1011 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 SUGP1Q8IWZ8 645 aaKnown RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 IFNL3Q8IZI9 196 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 APBB2Q92870 758 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 COX4I2Q96KJ9 171 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 HRASLS5Q96KN8 279 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 C11orf84Q9BUA3 381 aaPredicted RBP7.83□□□□□ -1.16
NR1I3-229ENST00000511748 ATP13A1Q9HD20 1204 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 MTUS1Q9ULD2 1270 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 LCTP09848 1927 aa7.83□□□□□ -1.16
NR1I3-229ENST00000511748 TRIOO75962 3097 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 PTPRSQ13332 1948 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 A0A1W2PQH9 124 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 NBNO60934 754 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 F2P00734 622 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 MMP3P08254 477 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 SRFP11831 508 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 CALML3P27482 149 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 DNAJA1P31689 397 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 CLCN7P51798 805 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 RPS6P62753 249 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 PPARAQ07869 468 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 SMAD4Q13485 552 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 CCDC96Q2M329 555 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 RALGAPA2Q2PPJ7 1873 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 EPC2Q52LR7 807 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 GPATCH4Q5T3I0 446 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 SYDE2Q5VT97 1194 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 KCTD1Q719H9 257 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 PPTC7Q8NI37 304 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 NSUN6Q8TEA1 469 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 CPLX3Q8WVH0 158 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 SEPT8Q92599 483 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 EDAQ92838 391 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 OSBP2Q969R2 916 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 YME1L1Q96TA2 773 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 ASPNQ9BXN1 380 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 SLC5A6Q9Y289 635 aa7.82□□□□□ -1.16
NR1I3-229ENST00000511748 OAS3Q9Y6K5 1087 aaKnown RBP7.82□□□□□ -1.16
NR1I3-229ENST00000511748 C5orf67F2Z3F1 127 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 H3BQ06 376 aaPredicted RBP7.81□□□□□ -1.16
NR1I3-229ENST00000511748 NFIBO00712 420 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 ORC4O43929 436 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 TOP1P11387 765 aaKnown RBP7.81□□□□□ -1.16
NR1I3-229ENST00000511748 ETFBP38117 255 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 CCNFP41002 786 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 ARID5AQ03989 594 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 GPM6BQ13491 265 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 GPNMBQ14956 572 aa7.81□□□□□ -1.16
NR1I3-229ENST00000511748 STXBP2Q15833 593 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms