RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, human

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS4-208	ENST00000510801	SLC39A4	Q6P5W5	647 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	TMC7	Q7Z402	723 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	ADGRD2	Q7Z7M1	963 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	VPS52	Q8N1B4	723 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	CEP120	Q8N960	986 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	DHX58	Q96C10	678 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	TCHP	Q9BT92	498 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	APOL6	Q9BWW8	343 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	HAPLN2	Q9GZV7	340 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	GBP3	Q9H0R5	595 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	MRPL44	Q9H9J2	332 aa	Known RBP	13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	PANK4	Q9NVE7	773 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	KLK14	Q9P0G3	267 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	ADAM28	Q9UKQ2	775 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	EXOC7	Q9UPT5	735 aa		13.61	□□□□□ -0.23
COPS4-208	ENST00000510801	MUC3A	Q02505	3323 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	TTC26	A0AVF1	554 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	EIF3D	O15371	548 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	MEFV	O15553	781 aa	Predicted RBP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	ACTN4	O43707	911 aa	Known RBP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	OR1G1	P47890	313 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	COASY	Q13057	564 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	SLC10A6	Q3KNW5	377 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	STXBP4	Q6ZWJ1	553 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	UNC13D	Q70J99	1090 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	CD302	Q8IX05	232 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	MICAL1	Q8TDZ2	1067 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	DDX27	Q96GQ7	796 aa	Known RBP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	ZBTB45	Q96K62	511 aa	Predicted RBP	13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	MSLNL	Q96KJ4	702 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	ACCS	Q96QU6	501 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	HERC2P3	Q9BVR0	1158 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	ZHX3	Q9H4I2	956 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	TLE6	Q9H808	572 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	TMEM206	Q9H813	350 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	ENTPD7	Q9NQZ7	604 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	GDA	Q9Y2T3	454 aa		13.6	□□□□□ -0.23
COPS4-208	ENST00000510801	HIDE1	A8MVS5	230 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	KIAA0391	O15091	583 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	PAPLN	O95428	1278 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	GLP2R	O95838	553 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	IDE	P14735	1019 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	PFKFB1	P16118	471 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	CYP3A5	P20815	502 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	GART	P22102	1010 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	RPL9	P32969	192 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	NRIP1	P48552	1158 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	SNRPF	P62306	86 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	DSG1	Q02413	1049 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	ELAVL2	Q12926	359 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	PTPN14	Q15678	1187 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	ZBTB6	Q15916	424 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	UPP1	Q16831	310 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	KIAA0319	Q5VV43	1072 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	DCLRE1A	Q6PJP8	1040 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	PPFIBP1	Q86W92	1011 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	TMEM174	Q8WUU8	243 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	BICD1	Q96G01	975 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	ZMAT2	Q96NC0	199 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	RXFP1	Q9HBX9	757 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	ANKFY1	Q9P2R3	1169 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	CPSF3	Q9UKF6	684 aa	Known RBP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	DERA	Q9Y315	318 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	UBE4B	O95155	1302 aa		13.59	□□□□□ -0.23
COPS4-208	ENST00000510801	TBX10	O75333	385 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CXCL14	O95715	111 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	SRGAP2B	P0DMP2	458 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	HOXB8	P17481	243 aa	Predicted RBP	13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	PAX3	P23760	479 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	ADSS	P30520	456 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CREM	Q03060	361 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	TFF2	Q03403	129 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	USP41	Q3LFD5	358 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	PLPP4	Q5VZY2	271 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	FUT10	Q6P4F1	479 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	ZBTB33	Q86T24	672 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CEP57L1	Q8IYX8	460 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	SMRP1	Q8NCR6	262 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CXCL16	Q9H2A7	254 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	ASB7	Q9H672	318 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	MRPL17	Q9NRX2	175 aa	Known RBP	13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CLDND1	Q9NY35	253 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	CLEC1B	Q9P126	229 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	FNIP2	Q9P278	1114 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	FAM50B	Q9Y247	325 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	PCDHGC5	Q9Y5F6	944 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	PLXNA4	Q9HCM2	1894 aa		13.58	□□□□□ -0.24
COPS4-208	ENST00000510801	GRXCR2	A6NFK2	248 aa		13.57	□□□□□ -0.24
COPS4-208	ENST00000510801	ANKRD63	C9JTQ0	380 aa		13.57	□□□□□ -0.24
COPS4-208	ENST00000510801	CLASP2	O75122	1294 aa	Known RBP	13.57	□□□□□ -0.24
COPS4-208	ENST00000510801	GCNT3	O95395	438 aa		13.57	□□□□□ -0.24
COPS4-208	ENST00000510801	KCNA5	P22460	613 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms