RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
UBE2D3-228ENST00000508974 MAN1C1Q9NR34 630 aa16.25■□□□□ 0.19
UBE2D3-228ENST00000508974 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
UBE2D3-228ENST00000508974 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
UBE2D3-228ENST00000508974 MTCL1Q9Y4B5 1905 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 EFEMP2O95967 443 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 KRT18P05783 430 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 ADH1AP07327 375 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 IGFBP6P24592 240 aaPredicted RBP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 MATR3P43243 847 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 SMTNP53814 917 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 YARSP54577 528 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 DSG1Q02413 1049 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 USP41Q3LFD5 358 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 RTP2Q5QGT7 225 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 USP49Q70CQ1 688 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 TMEM161BQ8NDZ6 487 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 RIPOR3Q96MK2 946 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 CLIC6Q96NY7 704 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 CCDC94Q9BW85 323 aaPredicted RBP16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 SFXN1Q9H9B4 322 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 CHST7Q9NS84 486 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 BLOC1S4Q9NUP1 217 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 SSX2IPQ9Y2D8 614 aa16.24■□□□□ 0.19
UBE2D3-228ENST00000508974 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■■ 50.5
UBE2D3-228ENST00000508974 GLUD1P00367 558 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 GRM5P41594 1212 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 MTHFRP42898 656 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 PTPAQ15257 358 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 HERC4Q5GLZ8 1057 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 FAM171A1Q5VUB5 890 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 MPZL3Q6UWV2 235 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 SPIRE2Q8WWL2 714 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 RAD54LQ92698 747 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 BICD1Q96G01 975 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 NECTIN4Q96NY8 510 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 PTPRHQ9HD43 1115 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 MTMR6Q9Y217 621 aa16.23■□□□□ 0.19
UBE2D3-228ENST00000508974 PRR33A8MZF0 331 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 C2CD4DB7Z1M9 353 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 K7ENM7 598 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 ABLIM1O14639 778 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 STX6O43752 255 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 FAM13AO94988 1023 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 MCF2P10911 925 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 CLCNKBP51801 687 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 SOX4Q06945 474 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 ATAT1Q5SQI0 421 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 RXFP1Q9HBX9 757 aa16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 TOPORSQ9NS56 1045 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 LARSQ9P2J5 1176 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-228ENST00000508974 SMIM28A0A1B0GU29 152 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 I3L4J1 428 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 RFPL2O75678 378 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 PROZP22891 400 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 NCKAP1LP55160 1127 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 NOLC1Q14978 699 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 HAUS6Q7Z4H7 955 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 LARP4BQ92615 738 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 SNX27Q96L92 541 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 ACAP3Q96P50 834 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 USP28Q96RU2 1077 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 NTPCRQ9BSD7 190 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 TTPALQ9BTX7 342 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 NR2E1Q9Y466 385 aa16.21■□□□□ 0.19
UBE2D3-228ENST00000508974 CCDC195A0A1B0GUA6 201 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 MEFVO15553 781 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 SLC26A4O43511 780 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 TGM5O43548 720 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 TBCAO75347 108 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 TOM1L1O75674 476 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 B3GAT3O94766 335 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 PSMD5Q16401 504 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 HFE2Q6ZVN8 426 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 GPR149Q86SP6 731 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 TMEM130Q8N3G9 435 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 TDRD5Q8NAT2 981 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 EDAQ92838 391 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 C18orf25Q96B23 403 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 ZMAT2Q96NC0 199 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 HCN4Q9Y3Q4 1203 aa16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 SRPRBQ9Y5M8 271 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-228ENST00000508974 MYO10Q9HD67 2058 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms