RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 KHSRPQ92945 711 aaKnown RBP eCLIP25.66■■□□□ 1.75e-6■■■■□ 19.6
CSNK1G3-204ENST00000508708 SNX27Q96L92 541 aa25.66■■□□□ 1.7
CSNK1G3-204ENST00000508708 KLHL5Q96PQ7 755 aa25.66■■□□□ 1.7
CSNK1G3-204ENST00000508708 CCDC94Q9BW85 323 aaPredicted RBP25.66■■□□□ 1.7
CSNK1G3-204ENST00000508708 ANKFY1Q9P2R3 1169 aa25.66■■□□□ 1.7
CSNK1G3-204ENST00000508708 CITO14578 2027 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 MYMKA6NI61 221 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 EPCAMP16422 314 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 HOXB8P17481 243 aaPredicted RBP25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 GLUD2P49448 558 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 OSTNP61366 133 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 DSG1Q02413 1049 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 CCDC73Q6ZRK6 1079 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 DNAJC19Q96DA6 116 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 MRPL17Q9NRX2 175 aaKnown RBP25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 TOPORSQ9NS56 1045 aaPredicted RBP25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 TBX20Q9UMR3 447 aa25.65■■□□□ 1.7
CSNK1G3-204ENST00000508708 DDX12PQ92771 950 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 B3GALT6Q96L58 329 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 ZMAT2Q96NC0 199 aaKnown RBP25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 TCHPQ9BT92 498 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 ST6GALNAC4Q9H4F1 302 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 RXFP1Q9HBX9 757 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 CNTN3Q9P232 1028 aa25.64■■□□□ 1.7
CSNK1G3-204ENST00000508708 SMIM28A0A1B0GU29 152 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 HARSP12081 509 aaKnown RBP25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 NMT1P30419 496 aaKnown RBP25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 CLCN4P51793 760 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 YARSP54577 528 aaKnown RBP25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 GTF2BQ00403 316 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 SOX4Q06945 474 aaPredicted RBP25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 E2F4Q16254 413 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 AXDND1Q5T1B0 1012 aaPredicted RBP25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 DYMQ7RTS9 669 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 MAP4K3Q8IVH8 894 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 GPR65Q8IYL9 337 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 EMILIN2Q9BXX0 1053 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 ZHX3Q9H4I2 956 aa25.63■■□□□ 1.69
CSNK1G3-204ENST00000508708 SF3B1O75533 1304 aaKnown RBP eCLIP25.63■■□□□ 1.693e-6■■■■■ 67.9
CSNK1G3-204ENST00000508708 PDCD11Q14690 1871 aaKnown RBP25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 TMEM189-UBE2V1I3L0A0 370 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 C2CD2LO14523 706 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 FAM189A1O60320 539 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 KCNE1P15382 129 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 STAT6P42226 847 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 FOXD4L6Q3SYB3 417 aaPredicted RBP25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 SLC39A4Q6P5W5 647 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 SHC4Q6S5L8 630 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 FOXD4L3Q6VB84 417 aaPredicted RBP25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 SV2BQ7L1I2 683 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 PPFIBP1Q86W92 1011 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 SFR1Q86XK3 245 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 HASPINQ8TF76 798 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 ACAP3Q96P50 834 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 GOLGA2P5Q9HBQ8 144 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 DZANK1Q9NVP4 752 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 CDH22Q9UJ99 828 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 SSX2IPQ9Y2D8 614 aa25.62■■□□□ 1.69
CSNK1G3-204ENST00000508708 VWA8A3KMH1 1905 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 HNRNPDLO14979 420 aaKnown RBP25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 TEX28O15482 410 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 CLDN3O15551 220 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 CUTAO60888 179 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 TADA2AO75478 443 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 PPP1R37O75864 691 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 IGFBP6P24592 240 aaPredicted RBP25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 SLC10A6Q3KNW5 377 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 USP41Q3LFD5 358 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 SEZ6Q53EL9 994 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 CD300LGQ6UXG3 332 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 BICD1Q96G01 975 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 POP1Q99575 1024 aaKnown RBP25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 APOL5Q9BWW9 433 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 PANK2Q9BZ23 570 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 PLXNA3P51805 1871 aa25.61■■□□□ 1.69
CSNK1G3-204ENST00000508708 FRMD3A2A2Y4 597 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 SSTR3P32745 418 aaPredicted RBP25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 LIG4P49917 911 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 CLCNKBP51801 687 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 CBX2Q14781 532 aaPredicted RBP25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 UPP1Q16831 310 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 TPRNQ4KMQ1 711 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 RTP2Q5QGT7 225 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 ATL3Q6DD88 541 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 PDILTQ8N807 584 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 TMEM87AQ8NBN3 555 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 C3orf58Q8NDZ4 430 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 KCNG4Q8TDN1 519 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 STRA6Q9BX79 667 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 ZDHHC9Q9Y397 364 aa25.6■■□□□ 1.69
CSNK1G3-204ENST00000508708 KLRC2P26717 231 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 ABCD1P33897 745 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 DNM1Q05193 864 aaKnown RBP25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 ZC2HC1CQ53FD0 456 aaPredicted RBP25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 FEZF2Q8TBJ5 459 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 FBXL18Q96ME1 805 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 UROC1Q96N76 676 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 PHF7Q9BWX1 381 aaPredicted RBP25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 ADAM7Q9H2U9 754 aa25.59■■□□□ 1.69
CSNK1G3-204ENST00000508708 SEL1LQ9UBV2 794 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms