RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ESPNLQ6ZVH7 1005 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 KIF18BQ86Y91 864 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 CDYL2Q8N8U2 506 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 GPR150Q8NGU9 434 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 ZNF496Q96IT1 587 aaPredicted RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 FAM193BQ96PV7 902 aaPredicted RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 MTFR1LQ9H019 292 aa5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 ZNF768Q9H5H4 540 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 CDK12Q9NYV4 1490 aaPredicted RBP5.51□□□□□ -1.53
PDLIM5-211ENST00000508531 CLGNO14967 610 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 RECQL4O94761 1208 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 GCP02774 474 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 PFKMP08237 780 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 PROZP22891 400 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 IRX3P78415 501 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 PTPAQ15257 358 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 CCDC144BQ3MJ40 725 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 DNTTIP2Q5QJE6 756 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 KCNV1Q6PIU1 500 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 FDXACB1Q9BRP7 624 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 CPEB1Q9BZB8 566 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 MS4A5Q9H3V2 200 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 EIF2B4Q9UI10 523 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 BRD4O60885 1362 aaPredicted RBP5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 SYNMO15061 1565 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 SAMD9LQ8IVG5 1584 aa5.5□□□□□ -1.53
PDLIM5-211ENST00000508531 HFM1A2PYH4 1435 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 TROQ12816 1431 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 DEPDC5O75140 1603 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 CDC42BPBQ9Y5S2 1711 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 ZNF500O60304 480 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 DNAJC6O75061 913 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 SEC24DO94855 1032 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PTMAP06454 111 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 POU3F2P20265 443 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 ZFP36P26651 326 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 KRTAP1-1Q07627 177 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 MRPL49Q13405 166 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.535e-8■■■■■ 41.6
PDLIM5-211ENST00000508531 TCEA2Q15560 299 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 SASS6Q6UVJ0 657 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 FAM83AQ86UY5 434 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 SYNPOQ8N3V7 929 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PDCL2Q8N4E4 241 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 IL17RAQ96F46 866 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 GPR101Q96P66 508 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PPP1R9BQ96SB3 815 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 LSM14BQ9BX40 385 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PIF1Q9H611 641 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 CHMP5Q9NZZ3 219 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 POGKQ9P215 609 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 USP36Q9P275 1121 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 EID1Q9Y6B2 187 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 MSH6P52701 1360 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
PDLIM5-211ENST00000508531 FMN1Q68DA7 1419 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 LRRC9Q6ZRR7 1453 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 ARHGAP35Q9NRY4 1499 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 PRSS38A1L453 326 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 TRIM24O15164 1050 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 GYPEP15421 78 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 XPAP23025 273 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 DUSP2Q05923 314 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 MGAT5Q09328 741 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 VPS72Q15906 364 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 TKFCQ3LXA3 575 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 TIGD2Q4W5G0 525 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 PLEKHG4Q58EX7 1191 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 DPY19L2P1Q6NXN4 242 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 TAS1R1Q7RTX1 841 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 XYLT1Q86Y38 959 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 HOMER1Q86YM7 354 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 GLB1L3Q8NCI6 653 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 OR52N2Q8NGI0 321 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 GAB3Q8WWW8 586 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 DDX17Q92841 729 aaKnown RBP5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 RNPC3Q96LT9 517 aaKnown RBP5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 KCNH6Q9H252 994 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 YY1AP1Q9H869 796 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 HDAC5Q9UQL6 1122 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 HS3ST4Q9Y661 456 aa5.48□□□□□ -1.53
PDLIM5-211ENST00000508531 PZPP20742 1482 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 NLRP1Q9C000 1473 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 LRPPRCP42704 1394 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 GRID2IPA4D2P6 1211 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 AHRRA9YTQ3 701 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 APOBEC3AP31941 199 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 GZMKP49863 264 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 WNT3AP56704 352 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 FAM189BP81408 668 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 GABPB1Q06547 395 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 RALBP1Q15311 655 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 GPR158Q5T848 1215 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 CTR9Q6PD62 1173 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms