RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SLC16A4O15374 487 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 KIF4AO95239 1232 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 ADH1AP07327 375 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MAPTP10636 758 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MCF2P10911 925 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 UBA7P41226 1012 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 ZNF131P52739 623 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 USP41Q3LFD5 358 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 ZNF568Q3ZCX4 644 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MPZL3Q6UWV2 235 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 APBB1IPQ7Z5R6 666 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 CMASQ8NFW8 434 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 EDAQ92838 391 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 CDK5RAP3Q96JB5 506 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 B3GALT6Q96L58 329 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 RHOBTB2Q9BYZ6 727 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 CCSER1Q9C0I3 900 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 SFXN1Q9H9B4 322 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 KCNG1Q9UIX4 513 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 ODF2LQ9ULJ1 636 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MTMR6Q9Y217 621 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MORC2Q9Y6X9 1032 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.822e-9■■■■■ 149.3
PDLIM5-209ENST00000506632 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 MUC6Q6W4X9 2439 aa9.96□□□□□ -0.82
PDLIM5-209ENST00000506632 VWA8A3KMH1 1905 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 NPHP3-ACAD11A0A0J9YXS1 232 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 C2CD4DB7Z1M9 353 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 MEFVO15553 781 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 TADA2AO75478 443 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 TOM1L1O75674 476 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 PLCG1P19174 1290 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 NCKAP1LP55160 1127 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 ZXDAP98168 799 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 KARSQ15046 597 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 ATAT1Q5SQI0 421 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 FAM173BQ6P4H8 233 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 LILRA6Q6PI73 481 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 CD300LGQ6UXG3 332 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 TMC5Q6UXY8 1006 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 ZPBP2Q6X784 338 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 C15orf39Q6ZRI6 1047 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 CALML4Q96GE6 196 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 SNX27Q96L92 541 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 REEP2Q9BRK0 252 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 MAN1C1Q9NR34 630 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 TOPORSQ9NS56 1045 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 FBXO2Q9UK22 296 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 NR2E1Q9Y466 385 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 CLIC4Q9Y696 253 aa9.95□□□□□ -0.82
PDLIM5-209ENST00000506632 ZDBF2Q9HCK1 2354 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 CITO14578 2027 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 MTCL1Q9Y4B5 1905 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 SMIM28A0A1B0GU29 152 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 H0YCG3 227 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 GLUD1P00367 558 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 PIGRP01833 764 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 KCNE1P15382 129 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 SCP2P22307 547 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 IGFBP6P24592 240 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 SMTNP53814 917 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 CREMQ03060 361 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 SOX4Q06945 474 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 MCL1Q07820 350 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 ELAVL2Q12926 359 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 MCM6Q14566 821 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 UPP1Q16831 310 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 GLRA4Q5JXX5 417 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 USP49Q70CQ1 688 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 BMP8AQ7Z5Y6 402 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 ZDHHC14Q8IZN3 488 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 LNX1Q8TBB1 728 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 HASPINQ8TF76 798 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 RAD54LQ92698 747 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms