RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 VARS2Q5ST30 1063 aaKnown RBP18.69■□□□□ 0.58
DDR1-257ENST00000505534 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
DDR1-257ENST00000505534 OXER1Q8TDS5 423 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 PRIMPOLQ96LW4 560 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 CCDC43Q96MW1 224 aaKnown RBP18.69■□□□□ 0.58
DDR1-257ENST00000505534 TM6SF1Q9BZW5 370 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 PRMT7Q9NVM4 692 aaPredicted RBP18.69■□□□□ 0.58
DDR1-257ENST00000505534 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 PCDHGA2Q9Y5H1 932 aa18.69■□□□□ 0.58
DDR1-257ENST00000505534 CCL16O15467 120 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 KIF4AO95239 1232 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 THP07101 528 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 XRCC6P12956 609 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDR1-257ENST00000505534 SDHBP21912 280 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 RARRES1P49788 294 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 RTL10Q7L3V2 364 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 ITFG1Q8TB96 612 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 HASPINQ8TF76 798 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 ATRIPQ8WXE1 791 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 POLR3FQ9H1D9 316 aaPredicted RBP18.68■□□□□ 0.58
DDR1-257ENST00000505534 LTB4R2Q9NPC1 389 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 KCNH3Q9ULD8 1083 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 MTF2Q9Y483 593 aaPredicted RBP18.68■□□□□ 0.58
DDR1-257ENST00000505534 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
DDR1-257ENST00000505534 COL4A3Q01955 1670 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 SPTBN2O15020 2390 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 CASTOR2A6NHX0 329 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 CSTF1Q05048 431 aaKnown RBP18.67■□□□□ 0.58
DDR1-257ENST00000505534 SCRN1Q12765 414 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 RAB33AQ14088 237 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 FAM187BQ17R55 369 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 EARS2Q5JPH6 523 aaKnown RBP18.67■□□□□ 0.58
DDR1-257ENST00000505534 ZBTB41Q5SVQ8 909 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 AXDND1Q5T1B0 1012 aaPredicted RBP18.67■□□□□ 0.58
DDR1-257ENST00000505534 SLC7A14Q8TBB6 771 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 NELL2Q99435 816 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 GJB4Q9NTQ9 266 aa18.67■□□□□ 0.58
DDR1-257ENST00000505534 F5P12259 2224 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 LRRIQ4A6NIV6 560 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 PTGESO14684 152 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 NCAM2O15394 837 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 ADAM12O43184 909 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 ZBTB44Q8NCP5 570 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 SECISBP2LQ93073 1101 aaKnown RBP18.66■□□□□ 0.58
DDR1-257ENST00000505534 CLDN23Q96B33 292 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 KXD1Q9BQD3 176 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 FZD8Q9H461 694 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
DDR1-257ENST00000505534 ZSCAN32Q9NX65 697 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 SNTG2Q9NY99 539 aa18.66■□□□□ 0.58
DDR1-257ENST00000505534 N4BP3O15049 544 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 CD72P21854 359 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 OR1D2P34982 312 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 NAB2Q15742 525 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 CALCRLQ16602 461 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 PABPC1LQ4VXU2 614 aaKnown RBP18.65■□□□□ 0.58
DDR1-257ENST00000505534 CDCA2Q69YH5 1023 aaPredicted RBP18.65■□□□□ 0.58
DDR1-257ENST00000505534 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
DDR1-257ENST00000505534 ZBTB8OSQ8IWT0 167 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 NPAS3Q8IXF0 933 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 PIGOQ8TEQ8 1089 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 NELL1Q92832 810 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
DDR1-257ENST00000505534 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
DDR1-257ENST00000505534 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
DDR1-257ENST00000505534 EIF5BO60841 1220 aaKnown RBP18.64■□□□□ 0.57
DDR1-257ENST00000505534 RECQL4O94761 1208 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 RPS9P46781 194 aaKnown RBP18.64■□□□□ 0.57
DDR1-257ENST00000505534 ZNF852Q6ZMS4 543 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 TPRG1Q6ZUI0 275 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 MCPH1Q8NEM0 835 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 ADPGKQ9BRR6 497 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 EPC1Q9H2F5 836 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 GDE1Q9NZC3 331 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
DDR1-257ENST00000505534 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
DDR1-257ENST00000505534 FAM205CA6NFA0 338 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 TMEM189-UBE2V1I3L0A0 370 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 LILRB5O75023 590 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 ECI2O75521 394 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 FGFR3P22607 806 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 TARSP26639 723 aaKnown RBP18.63■□□□□ 0.57
DDR1-257ENST00000505534 KRT2P35908 639 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 NR5A1Q13285 461 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 WASF1Q92558 559 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 TNFRSF25Q93038 417 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 C2orf40Q9H1Z8 148 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 BRMS1Q9HCU9 246 aa18.63■□□□□ 0.57
DDR1-257ENST00000505534 MRPS17Q9Y2R5 130 aaKnown RBP18.63■□□□□ 0.57
DDR1-257ENST00000505534 MRPS23Q9Y3D9 190 aaKnown RBP18.63■□□□□ 0.57
DDR1-257ENST00000505534 A0A087WWV3 80 aa18.62■□□□□ 0.57
DDR1-257ENST00000505534 TTLL13PA6NNM8 815 aa18.62■□□□□ 0.57
DDR1-257ENST00000505534 PRR5-ARHGAP8B1AHC4 643 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms