RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 KANK3Q6NY19 840 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 GPBP1Q86WP2 473 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 GPR65Q8IYL9 337 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 CEP120Q8N960 986 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 RAD54LQ92698 747 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 NECTIN4Q96NY8 510 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 LARSQ9P2J5 1176 aaKnown RBP27.8■■■□□ 2.04
PVT1-201ENST00000504719 ODF2LQ9ULJ1 636 aa27.8■■■□□ 2.04
PVT1-201ENST00000504719 TEX28O15482 410 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 ADH1AP07327 375 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 MCF2P10911 925 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 MTHFRP42898 656 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 STRN3Q13033 797 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 MCM6Q14566 821 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 ZBTB33Q86T24 672 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 KRI1Q8N9T8 703 aaKnown RBP27.79■■■□□ 2.04
PVT1-201ENST00000504719 EPSTI1Q96J88 318 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 B3GALT6Q96L58 329 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 PPP1R10Q96QC0 940 aaKnown RBP27.79■■■□□ 2.04
PVT1-201ENST00000504719 CCDC94Q9BW85 323 aaPredicted RBP27.79■■■□□ 2.04
PVT1-201ENST00000504719 POMKQ9H5K3 350 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 ZDHHC9Q9Y397 364 aa27.79■■■□□ 2.04
PVT1-201ENST00000504719 SF3B1O75533 1304 aaKnown RBP eCLIP27.78■■■□□ 2.047e-6■■■■■ 104.3
PVT1-201ENST00000504719 KIF4AO95239 1232 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 NCKAP1LP55160 1127 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 DHX8Q14562 1220 aaKnown RBP27.78■■■□□ 2.04
PVT1-201ENST00000504719 XKR4Q5GH76 650 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 MPZL3Q6UWV2 235 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 ALKAL1Q6UXT8 129 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 USP49Q70CQ1 688 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 RASSF8Q8NHQ8 419 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 ZBTB45Q96K62 511 aaPredicted RBP27.78■■■□□ 2.04
PVT1-201ENST00000504719 RIPOR3Q96MK2 946 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 REEP2Q9BRK0 252 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 TCHPQ9BT92 498 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 SFXN1Q9H9B4 322 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 MYH15Q9Y2K3 1946 aa27.78■■■□□ 2.04
PVT1-201ENST00000504719 C2orf16Q68DN1 1984 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 SPTLC2O15270 562 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 YEATS4O95619 227 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 WEE2P0C1S8 567 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 YARSP54577 528 aaKnown RBP27.77■■■□□ 2.04
PVT1-201ENST00000504719 OSTNP61366 133 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 GLRA4Q5JXX5 417 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 HASPINQ8TF76 798 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 LARP4BQ92615 738 aaKnown RBP27.77■■■□□ 2.04
PVT1-201ENST00000504719 KCNN1Q92952 543 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.77■■■□□ 2.04
PVT1-201ENST00000504719 FNIP2Q9P278 1114 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 VWA8A3KMH1 1905 aa27.77■■■□□ 2.04
PVT1-201ENST00000504719 H0YCG3 227 aa27.76■■■□□ 2.03
PVT1-201ENST00000504719 DNM1Q05193 864 aaKnown RBP27.76■■■□□ 2.03
PVT1-201ENST00000504719 ATAT1Q5SQI0 421 aa27.76■■■□□ 2.03
PVT1-201ENST00000504719 RIN2Q8WYP3 895 aaPredicted RBP27.76■■■□□ 2.03
PVT1-201ENST00000504719 TOPORSQ9NS56 1045 aaPredicted RBP27.76■■■□□ 2.03
PVT1-201ENST00000504719 PDCD11Q14690 1871 aaKnown RBP27.76■■■□□ 2.03
PVT1-201ENST00000504719 DENND4AQ7Z401 1863 aa27.76■■■□□ 2.03
PVT1-201ENST00000504719 SMIM28A0A1B0GU29 152 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 PRR33A8MZF0 331 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 TOM1L1O75674 476 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 DDIT3P35638 169 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 ZNF131P52739 623 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 ATL3Q6DD88 541 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 TMC5Q6UXY8 1006 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 ZPBP2Q6X784 338 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 HAUS6Q7Z4H7 955 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 FEZF2Q8TBJ5 459 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 ACAP3Q96P50 834 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 MAN1C1Q9NR34 630 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 NR2E1Q9Y466 385 aa27.75■■■□□ 2.03
PVT1-201ENST00000504719 SPDYE4A6NLX3 237 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 PPP6R2O75170 966 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 FAM13AO94988 1023 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 GLUD1P00367 558 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 C1RP00736 705 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 RTP2Q5QGT7 225 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 GPR149Q86SP6 731 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 MYCT1Q8N699 235 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 SNX27Q96L92 541 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 UROC1Q96N76 676 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 TTPALQ9BTX7 342 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 PARVGQ9HBI0 331 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 RAPGEFL1Q9UHV5 662 aa27.74■■■□□ 2.03
PVT1-201ENST00000504719 MYO10Q9HD67 2058 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 TMEM189-UBE2V1I3L0A0 370 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 HARSP12081 509 aaKnown RBP27.73■■■□□ 2.03
PVT1-201ENST00000504719 SP100P23497 879 aaPredicted RBP27.73■■■□□ 2.03
PVT1-201ENST00000504719 TXLNAP40222 546 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 CLCNKBP51801 687 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 CREMQ03060 361 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 ELAVL2Q12926 359 aaKnown RBP27.73■■■□□ 2.03
PVT1-201ENST00000504719 NOLC1Q14978 699 aaKnown RBP eCLIP27.73■■■□□ 2.036e-11■■■■□ 21.2
PVT1-201ENST00000504719 FAM171A1Q5VUB5 890 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 DCLRE1AQ6PJP8 1040 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 EDAQ92838 391 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 ANKFY1Q9P2R3 1169 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 CCDC39Q9UFE4 941 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 CFAP45Q9UL16 551 aa27.73■■■□□ 2.03
PVT1-201ENST00000504719 KRT18P05783 430 aaKnown RBP27.72■■■□□ 2.03
PVT1-201ENST00000504719 KCNE1P15382 129 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms