RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 ZDHHC14Q8IZN3 488 aa24.9■■□□□ 1.58
CDC42SE2-207ENST00000504701 TMEM130Q8N3G9 435 aa24.9■■□□□ 1.58
CDC42SE2-207ENST00000504701 PRSS33Q8NF86 280 aa24.9■■□□□ 1.58
CDC42SE2-207ENST00000504701 PPP1R10Q96QC0 940 aaKnown RBP24.9■■□□□ 1.58
CDC42SE2-207ENST00000504701 SORCS3Q9UPU3 1222 aa24.9■■□□□ 1.58
CDC42SE2-207ENST00000504701 SF3B1O75533 1304 aaKnown RBP eCLIP24.89■■□□□ 1.581e-7■■■■■ 26.8
CDC42SE2-207ENST00000504701 SLC12A3P55017 1021 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 ZNF568Q3ZCX4 644 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 TMEM119Q4V9L6 283 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 LARP1BQ659C4 914 aaKnown RBP24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 LILRA6Q6PI73 481 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 FBXL6Q8N531 539 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 C3orf58Q8NDZ4 430 aa24.89■■□□□ 1.58
CDC42SE2-207ENST00000504701 I3L4J1 428 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 HARSP12081 509 aaKnown RBP24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 HOXD11P31277 338 aaPredicted RBP24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 CLCNKBP51801 687 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 NHLH1Q02575 133 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 SEZ6Q53EL9 994 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 C15orf39Q6ZRI6 1047 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 SYT2Q8N9I0 419 aaPredicted RBP24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 CMASQ8NFW8 434 aaPredicted RBP24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 LNX1Q8TBB1 728 aaPredicted RBP24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 DRC1Q96MC2 740 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 CLSTN3Q9BQT9 956 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 TMEM134Q9H6X4 195 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 FNIP2Q9P278 1114 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 USTQ9Y2C2 406 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 DOCK8Q8NF50 2099 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 ZDBF2Q9HCK1 2354 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 CITO14578 2027 aa24.88■■□□□ 1.57
CDC42SE2-207ENST00000504701 PLA2G4BP0C869 781 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 GUCY2CP25092 1073 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 GRM5P41594 1212 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 MCM2P49736 904 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 MTMR3Q13615 1198 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 ARSHQ5FYA8 562 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 ST13P5Q8NFI4 369 aaPredicted RBP24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 SMG7Q92540 1137 aaKnown RBP24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 ZMAT2Q96NC0 199 aaKnown RBP24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 TTPALQ9BTX7 342 aa24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 MRPL4Q9BYD3 311 aaKnown RBP24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 PDCD11Q14690 1871 aaKnown RBP24.87■■□□□ 1.57
CDC42SE2-207ENST00000504701 SMIM28A0A1B0GU29 152 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 PROZP22891 400 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 BRCC3P46736 316 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 PSMD5Q16401 504 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 PIK3R5Q8WYR1 880 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 MYADMQ96S97 322 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 PHOX2BQ99453 314 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 NT5C3AQ9H0P0 336 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 CLUHO75153 1309 aa24.86■■□□□ 1.57
CDC42SE2-207ENST00000504701 ARL6IP4Q66PJ3 421 aaKnown RBP24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 ALKAL1Q6UXT8 129 aa24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 RSPO2Q6UXX9 243 aaPredicted RBP24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 SUGP1Q8IWZ8 645 aaKnown RBP24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 TMEM161BQ8NDZ6 487 aa24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 RSAD2Q8WXG1 361 aa24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 HAPLN2Q9GZV7 340 aa24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 WDR6Q9NNW5 1121 aaKnown RBP24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.85■■□□□ 1.57
CDC42SE2-207ENST00000504701 B3GAT3O94766 335 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 PLS3P13797 630 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 TKTP29401 623 aaKnown RBP24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 CUL4AQ13619 759 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 DHX8Q14562 1220 aaKnown RBP24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 UPP1Q16831 310 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 OTOP3Q7RTS5 596 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 ALYREFQ86V81 257 aaKnown RBP24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 PLCD3Q8N3E9 789 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 C18orf25Q96B23 403 aaPredicted RBP24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 CDK5RAP3Q96JB5 506 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 SNX27Q96L92 541 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 BLOC1S4Q9NUP1 217 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 ANKFY1Q9P2R3 1169 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 FBXW11Q9UKB1 542 aa24.84■■□□□ 1.57
CDC42SE2-207ENST00000504701 VPS37CA5D8V6 355 aaPredicted RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 MAPTP10636 758 aaKnown RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 SF3A1Q15459 793 aaKnown RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 XKR4Q5GH76 650 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 MPZL3Q6UWV2 235 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 GPR65Q8IYL9 337 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 ACSF2Q96CM8 615 aaPredicted RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 TCHPQ9BT92 498 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 CCDC94Q9BW85 323 aaPredicted RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 PLEKHA4Q9H4M7 779 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 KCNK12Q9HB15 430 aa24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 RBM19Q9Y4C8 960 aaKnown RBP24.83■■□□□ 1.57
CDC42SE2-207ENST00000504701 NARSO43776 548 aaKnown RBP24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 PAPLNO95428 1278 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 MCF2P10911 925 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 FGFR3P22607 806 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 AVPR2P30518 371 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 GBP2P32456 591 aaPredicted RBP24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 NTHL1P78549 312 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 TCF15Q12870 199 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 KARSQ15046 597 aaKnown RBP24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 FAM173BQ6P4H8 233 aa24.82■■□□□ 1.56
CDC42SE2-207ENST00000504701 UBALD2Q8IYN6 164 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms