RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 LRRC41Q15345 812 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ASIC2Q16515 512 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 INSCQ1MX18 579 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ZACNQ401N2 412 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRC24Q50LG9 513 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM26DQ5JW98 314 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TMTC4Q5T4D3 741 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR93Q6P2C0 686 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 HHIPL2Q6UWX4 724 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF589Q86UQ0 364 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR75Q8IWA0 830 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 DQX1Q8TE96 717 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 IPCEF1Q8WWN9 437 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC4A9Q96Q91 983 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 DDX23Q9BUQ8 820 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 METTL22Q9BUU2 404 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NTMT1Q9BV86 223 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NIFKQ9BYG3 293 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ZC3H12CQ9C0D7 883 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CEP44Q9C0F1 390 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 VPS37BQ9H9H4 285 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 KCTD5Q9NXV2 234 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CRNNQ9UBG3 495 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM184BQ9ULE4 1060 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 AGTPBP1Q9UPW5 1226 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 LZTS1Q9Y250 596 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CARD8Q9Y2G2 431 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NR2E3Q9Y5X4 410 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 EPN1Q9Y6I3 576 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SBF1O95248 1867 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SOWAHDA6NJG2 315 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SNAP23O00161 211 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SNPHO15079 494 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 BIRC5O15392 142 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ACSL4O60488 711 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NMT2O60551 498 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 EXOC3O60645 756 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TMCC1O94876 653 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 AMHP03971 560 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PRKACBP22694 351 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 STX2P32856 288 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TECP42680 631 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CYP2J2P51589 502 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 DSTNP60981 165 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TFAP4Q01664 338 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 BNIP1Q12981 228 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CFAP221Q4G0U5 840 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SRGAP1Q7Z6B7 1085 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 GSPT2Q8IYD1 628 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC47A1Q96FL8 570 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT12Q99456 494 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 VCX3BQ9H321 246 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ZSWIM6Q9HCJ5 1215 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 DTX4Q9Y2E6 619 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PTPN22Q9Y2R2 807 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PCDHB4Q9Y5E5 795 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 LAMA4Q16363 1823 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PABPN1LA6NDY0 278 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGAP42A6NI28 874 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SPDYE16A6NNV3 312 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 KCNJ18B7U540 433 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 BTBD19C9JJ37 291 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 KRIT1O00522 736 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RHOBTB3O94955 611 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 GCNT3O95395 438 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 POP4O95707 220 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CFBP00751 764 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TUBBP07437 444 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RETP07949 1114 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ITGA2BP08514 1039 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CYP21A2P08686 494 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TFPTP0C1Z6 253 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 IL6STP40189 918 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ARFIP2P53365 341 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CACNB3P54284 484 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 POLR2FP61218 127 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 MCL1Q07820 350 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 KCNJ12Q14500 433 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SF3B4Q15427 424 aaKnown RBP eCLIP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 MAPRE1Q15691 268 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PLEKHG6Q3KR16 790 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ERFEQ4G0M1 354 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR44Q5JSH3 913 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RASIP1Q5U651 963 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SUSD4Q5VX71 490 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 PAOXQ6QHF9 649 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RUFY4Q6ZNE9 571 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 MAMDC2Q7Z304 686 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SIRT2Q8IXJ6 389 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CACNA2D3Q8IZS8 1091 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGAP18Q8N392 663 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 GBP7Q8N8V2 638 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC110Q8TBZ0 833 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 HDAC11Q96DB2 347 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 EPSTI1Q96J88 318 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 IFT74Q96LB3 600 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ACAP3Q96P50 834 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TRAPPC9Q96Q05 1148 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms