RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ARFGAP3Q9NP61 516 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 C1orf112Q9NSG2 853 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 OGFRQ9NZT2 677 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 STXBP5LQ9Y2K9 1186 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 TARSL2A2RTX5 802 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 KIF4AO95239 1232 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 GJB1P08034 283 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 CYP11B1P15538 503 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ABCB4P21439 1286 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 PROZP22891 400 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 CLCN3P51790 818 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 PTENP60484 403 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 VSNL1P62760 191 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 FMO1Q01740 532 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 LINC01465Q8N7H1 131 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 DHX38Q92620 1227 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ARHGEF26Q96DR7 871 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ZBTB10Q96DT7 871 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 TINF2Q9BSI4 451 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 C16orf70Q9BSU1 422 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 THAP2Q9H0W7 228 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 GOLPH3Q9H4A6 298 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 OSGEPQ9NPF4 335 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ACP6Q9NPH0 428 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 EHD2Q9NZN4 543 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ACKR2O00590 384 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ATP8B1O43520 1251 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 RTN2O75298 545 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 PPFIA4O75335 1185 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 PAFAH1B1P43034 410 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 GRM1Q13255 1194 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 TCEAL1Q15170 157 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 RPS6KA1Q15418 735 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 CFAP221Q4G0U5 840 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 SEZ6Q53EL9 994 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 CCDC181Q5TID7 509 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 TSHZ1Q6ZSZ6 1077 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 SYCE1Q8N0S2 351 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 METTL13Q8N6R0 699 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 DDX1Q92499 740 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 NFKBIZQ9BYH8 718 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 PTPRHQ9HD43 1115 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ABCB6Q9NP58 842 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 SMARCAL1Q9NZC9 954 aa22.98■■□□□ 1.27
UBE2D3-216ENST00000503742 ZSWIM8A7E2V4 1837 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 SLC15A5A6NIM6 579 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 OGTO15294 1046 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 ITGBL1O95965 494 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 FTLP02792 175 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 HARSP12081 509 aaKnown RBP22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 HOXD8P13378 290 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 TNFSF9P41273 254 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 PIK3CAP42336 1068 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 DUSP28Q4G0W2 176 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 WDR44Q5JSH3 913 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 NPLOC4Q8TAT6 608 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 MS4A14Q96JA4 679 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 ABHD16BQ9H3Z7 469 aa22.97■■□□□ 1.27
UBE2D3-216ENST00000503742 COL1A2P08123 1366 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 SMPD1P17405 629 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 HADHBP55084 474 aaKnown RBP22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 CDR2Q01850 454 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 POU5F1BQ06416 359 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 BIRC3Q13489 604 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 TAF3Q5VWG9 929 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 ZBTB33Q86T24 672 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 OR5B17Q8NGF7 314 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 NLRP4Q96MN2 994 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 TCHPQ9BT92 498 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 MAGEB2O15479 319 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 TBC1D8O95759 1140 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 MMEP08473 750 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 PDE6CP51160 858 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 HUNKP57058 714 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 MBTD1Q05BQ5 628 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 NT5DC3Q86UY8 548 aa22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 CPSF3Q9UKF6 684 aaKnown RBP22.96■■□□□ 1.27
UBE2D3-216ENST00000503742 TRPM7Q96QT4 1865 aa22.95■■□□□ 1.27
UBE2D3-216ENST00000503742 SPDYE4A6NLX3 237 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 BUB1BO60566 1050 aaPredicted RBP22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 ZNF286BP0CG31 522 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 AP3M2P53677 418 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 IGBP1P78318 339 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 BEND6Q5SZJ8 279 aaPredicted RBP22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 PEX26Q7Z412 305 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 DAAM2Q86T65 1068 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 RHOT2Q8IXI1 618 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 MSL3Q8N5Y2 521 aaKnown RBP22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 MINDY3Q9H8M7 445 aa22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 APOBEC3GQ9HC16 384 aaKnown RBP22.95■■□□□ 1.26
UBE2D3-216ENST00000503742 DNA2P51530 1060 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 LONRF2Q1L5Z9 754 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 MPZL3Q6UWV2 235 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 IFNLR1Q8IU57 520 aaPredicted RBP22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 WDR49Q8IV35 697 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 TAF4BQ92750 862 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 ZNF668Q96K58 619 aaPredicted RBP22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 PBKQ96KB5 322 aa22.94■■□□□ 1.26
UBE2D3-216ENST00000503742 CALR3Q96L12 384 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms