RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SAP30BPQ9UHR5 308 aaKnown RBP3.35□□□□□ -1.87
SMAD1-203ENST00000502342 AJAP1Q9UKB5 411 aaPredicted RBP3.35□□□□□ -1.87
SMAD1-203ENST00000502342 RUVBL1Q9Y265 456 aaKnown RBP3.35□□□□□ -1.87
SMAD1-203ENST00000502342 USP15Q9Y4E8 981 aaPredicted RBP3.35□□□□□ -1.87
SMAD1-203ENST00000502342 PCDHGA9Q9Y5G4 932 aaKnown RBP3.35□□□□□ -1.87
SMAD1-203ENST00000502342 PCDHGA8Q9Y5G5 932 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 PCDHGA7Q9Y5G6 932 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 PCDHGA6Q9Y5G7 932 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 PCDHGA3Q9Y5H0 932 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 COL4A3BPQ9Y5P4 624 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 WASHC2CQ9Y4E1 1318 aa3.35□□□□□ -1.87
SMAD1-203ENST00000502342 FAM171A2A8MVW0 826 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ALG1L2C9J202 215 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 K7ESF4 209 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 TRIM24O15164 1050 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 NDUFS2O75306 463 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 NCR1O76036 304 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ENDOD1O94919 500 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PRSS23O95084 383 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ALOX15P16050 662 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 LAG3P18627 525 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ATP5JP18859 108 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 IBSPP21815 317 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 SLC6A2P23975 617 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ZFP36P26651 326 aaKnown RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PTGS2P35354 604 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 SLC6A9P48067 706 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 FLT3LGP49771 235 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 UBXN2BQ14CS0 331 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PTPAQ15257 358 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 INAVAQ3KP66 663 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 TIGD2Q4W5G0 525 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PDCD4Q53EL6 469 aaKnown RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 DRICH1Q6PGQ1 229 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 UBE3BQ7Z3V4 1068 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 GDF7Q7Z4P5 450 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PNMA8AQ86V59 439 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 PROKR1Q8TCW9 393 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 FUBP3Q96I24 572 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 SMAD5Q99717 465 aaKnown RBP3.34□□□□□ -1.87
SMAD1-203ENST00000502342 C7orf25Q9BPX7 421 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 MLST8Q9BVC4 326 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 MANSC1Q9H8J5 431 aa3.34□□□□□ -1.87
SMAD1-203ENST00000502342 ATRNL1Q5VV63 1379 aa3.34□□□□□ -1.88
SMAD1-203ENST00000502342 TCRBV7S2A1N4TA0A589 114 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SHTN1A0MZ66 631 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 UNC119BA6NIH7 251 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 RNASET2O00584 256 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 GABRDO14764 452 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 PJA2O43164 708 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 POMCP01189 267 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 AMY1AP04745 511 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SNRPA1P09661 255 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SPATA31D3P0C874 917 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 C5AR1P21730 350 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 PCSK1P29120 753 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ALDH1A3P47895 512 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SLC16A1P53985 500 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 MXRA7P84157 204 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SP140Q13342 867 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 IL10RAQ13651 578 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ODF1Q14990 250 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 PTPN21Q16825 1174 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 METRNLQ641Q3 311 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 LAIR1Q6GTX8 287 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ZNF529Q6P280 563 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 KCNV1Q6PIU1 500 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SPATA31D4Q6ZUB0 917 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 RSPH3Q86UC2 560 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 RPUSD2Q8IZ73 545 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ZGPATQ8N5A5 531 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 HOXB13Q92826 284 aaPredicted RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 CHFRQ96EP1 664 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 CYFIP2Q96F07 1278 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 NEU1Q99519 415 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 TTPALQ9BTX7 342 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 SLC46A2Q9BY10 475 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 REXO4Q9GZR2 422 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 IKZF4Q9H2S9 585 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 GSTO2Q9H4Y5 243 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 PCDH12Q9NPG4 1184 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 AKIP1Q9NQ31 210 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ZNF277Q9NRM2 450 aaPredicted RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 TUBD1Q9UJT1 453 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 FZD1Q9UP38 647 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 ATP11BQ9Y2G3 1177 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 TNKSO95271 1327 aa3.33□□□□□ -1.88
SMAD1-203ENST00000502342 MYBBP1AQ9BQG0 1328 aaKnown RBP3.33□□□□□ -1.88
SMAD1-203ENST00000502342 CENPVL1A0A0U1RR11 272 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 ANKRD62A6NC57 917 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 TRIM75PA6NK02 468 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 KIAA0391O15091 583 aaKnown RBP3.32□□□□□ -1.88
SMAD1-203ENST00000502342 TEX33O43247 280 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 PPFIA4O75335 1185 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 ABHD16AO95870 558 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 ITGB1P05556 798 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 HLA-DOAP06340 250 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 ZSCAN20P17040 1043 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms