RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DNAJC6O75061 913 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ADAM23O75077 832 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 MTA2O94776 668 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ACADSP16219 412 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SMARCA1P28370 1054 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CLK1P49759 484 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 MPP2Q14168 576 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLMAPQ14BN4 828 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 USH1GQ495M9 461 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TTBK2Q6IQ55 1244 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ECHDC2Q86YB7 292 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPATA20Q8TB22 786 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 PIGOQ8TEQ8 1089 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCDC127Q96BQ5 260 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TBC1D20Q96BZ9 403 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 HAPLN3Q96S86 360 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DNAJC7Q99615 494 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DDX47Q9H0S4 455 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DPH5Q9H2P9 285 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 AZI2Q9H6S1 392 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 AKAP11Q9UKA4 1901 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SMCO2A6NFE2 343 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 A6NNZ2 444 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 KCNJ18B7U540 433 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATMINO43313 823 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 DDAH1O94760 285 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMCC1O94876 653 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 T-ENOLP0DO92 83 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TNFRSF8P28908 595 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ARFIP2P53365 341 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SEC13P55735 322 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP11AP98196 1134 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 PRKG1Q13976 671 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 KCNJ12Q14500 433 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TUBB8Q3ZCM7 444 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ANKDD1AQ495B1 522 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCDC92Q53HC0 331 aaPredicted RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TCP11X2Q5H9J9 407 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM117BQ6P1L5 589 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF449Q6P9G9 518 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 IFT20Q8IY31 132 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CPNE9Q8IYJ1 553 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 GDAP1Q8TB36 358 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 EPS8L3Q8TE67 593 aaKnown RBP6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TLCD1Q96CP7 247 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 RPGRIP1Q96KN7 1286 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRAPPC9Q96Q05 1148 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 SH2D4AQ9H788 454 aa6.17□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCDC85CA6NKD9 419 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TTLL13PA6NNM8 815 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PIK3CDO00329 1044 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT86O43790 486 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCNT1O60563 726 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TBX10O75333 385 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ALDH2P05091 517 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 LYNP07948 512 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CDK4P11802 303 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 UBA7P41226 1012 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 HALP42357 657 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TXKP42681 527 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAFAH1B1P43034 410 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 KPNA1P52294 538 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 KIF5AQ12840 1032 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 HIC1Q14526 733 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ACAP1Q15027 740 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SNX30Q5VWJ9 437 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPATA24Q86W54 205 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 LENG1Q96BZ8 264 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC7A6OSQ96CW6 309 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 MIPEPQ99797 713 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 MKNK1Q9BUB5 465 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TIPINQ9BVW5 301 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 KIAA1683Q9H0B3 1180 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 RAB17Q9H0T7 212 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYLK2Q9H1R3 596 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 DHX36Q9H2U1 1008 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 RRAGCQ9HB90 399 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 NLRC4Q9NPP4 1024 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP8A1Q9Y2Q0 1164 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SH3GLB1Q9Y371 365 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 NVLO15381 856 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PGM3O95394 542 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TAL1P17542 331 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SERPINB3P29508 390 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC1A4P43007 532 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 DLGAP5Q15398 846 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PLPP6Q8IY26 295 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 FBXO22Q8NEZ5 403 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PRR11Q96HE9 360 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 GBP5Q96PP8 586 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM51Q9BSJ1 452 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PACSIN1Q9BY11 444 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms