RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 B4GALT5O43286 388 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 ECI2O75521 394 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 IFNAR1P17181 557 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 TGM1P22735 817 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
CDK9-205ENST00000498339 DMWDQ09019 674 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 CAPSQ13938 189 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 CTTNQ14247 550 aaKnown RBP12.94□□□□□ -0.34
CDK9-205ENST00000498339 GRM2Q14416 872 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
CDK9-205ENST00000498339 NELL1Q92832 810 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 BRD9Q9H8M2 597 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
CDK9-205ENST00000498339 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 ZMYM2Q9UBW7 1377 aa12.94□□□□□ -0.34
CDK9-205ENST00000498339 ADAM12O43184 909 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 OR1D2P34982 312 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 ELAVL2Q12926 359 aaKnown RBP12.93□□□□□ -0.34
CDK9-205ENST00000498339 NTRK3Q16288 839 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 TPH2Q8IWU9 490 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 CELF5Q8N6W0 485 aaKnown RBP12.93□□□□□ -0.34
CDK9-205ENST00000498339 ASAP3Q8TDY4 903 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 DNASE1L2Q92874 299 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 PLA2G2FQ9BZM2 168 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 GREB1Q4ZG55 1949 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 COL4A2P08572 1712 aa12.93□□□□□ -0.34
CDK9-205ENST00000498339 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 MAN2B1O00754 1011 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CPLX1O14810 134 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
CDK9-205ENST00000498339 LRG1P02750 347 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 THP07101 528 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 RETP07949 1114 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 RHOP08100 348 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CEBPBP17676 345 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CCR3P51677 355 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
CDK9-205ENST00000498339 SIM2Q14190 667 aaPredicted RBP12.92□□□□□ -0.34
CDK9-205ENST00000498339 EPHA7Q15375 998 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 AMHR2Q16671 573 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 IL31Q6EBC2 164 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
CDK9-205ENST00000498339 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 FAM3CQ92520 227 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CHRDQ9H2X0 955 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 XPNPEP1Q9NQW7 623 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 GDE1Q9NZC3 331 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
CDK9-205ENST00000498339 ZBTB39O15060 712 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 LRP3O75074 770 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 DEXIO95424 95 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 POU2F2P09086 479 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 ELF1P32519 619 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 UVSSAQ2YD98 709 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
CDK9-205ENST00000498339 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 ELSPBP1Q96BH3 223 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
CDK9-205ENST00000498339 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
CDK9-205ENST00000498339 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 CACNA1GO43497 2377 aa12.91□□□□□ -0.34
CDK9-205ENST00000498339 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 M0R2N6 131 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 PRRG1O14668 218 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 DGAT1O75907 488 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 RECQL4O94761 1208 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
CDK9-205ENST00000498339 LIG1P18858 919 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 SATB1Q01826 763 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 RAB33AQ14088 237 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
CDK9-205ENST00000498339 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 ZBTB8OSQ8IWT0 167 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 DDX1Q92499 740 aaKnown RBP12.9□□□□□ -0.34
CDK9-205ENST00000498339 IRF7Q92985 503 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 ADPGKQ9BRR6 497 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
CDK9-205ENST00000498339 LMAN1LQ9HAT1 526 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 ZFP14Q9HCL3 533 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms