RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RABL3Q5HYI8 236 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 OTUD7BQ6GQQ9 843 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 USP51Q70EK9 711 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 MIER2Q8N344 545 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 NRG4Q8WWG1 115 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 TFAP2CQ92754 450 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 SLC2A13Q96QE2 648 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 SMAD5Q99717 465 aaKnown RBP6.26□□□□□ -1.41
SSR3-209ENST00000498205 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 VPS11Q9H270 941 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 DDX56Q9NY93 547 aaKnown RBP6.26□□□□□ -1.41
SSR3-209ENST00000498205 INTUQ9ULD6 942 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 FYCO1Q9BQS8 1478 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA12O60330 932 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 GPR32O75388 356 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 SPATA31D3P0C874 917 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 HK1P19367 917 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 C5AR1P21730 350 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PTGS2P35354 604 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
SSR3-209ENST00000498205 C1QL3Q5VWW1 255 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 SPATA31D4Q6ZUB0 917 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PPM1NQ8N819 430 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 REXO4Q9GZR2 422 aaKnown RBP6.25□□□□□ -1.41
SSR3-209ENST00000498205 SPON1Q9HCB6 807 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 TCF7L1Q9HCS4 588 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA9Q9Y5G4 932 aaKnown RBP6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA8Q9Y5G5 932 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA7Q9Y5G6 932 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA6Q9Y5G7 932 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 PCDHGA3Q9Y5H0 932 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 CARMIL1Q5VZK9 1371 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 LAMC3Q9Y6N6 1575 aa6.25□□□□□ -1.41
SSR3-209ENST00000498205 LRRC9Q6ZRR7 1453 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 DTNBO60941 627 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 ALAS1P13196 640 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 CDC42EP1Q00587 391 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 TUBA3CQ13748 450 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 TOB2Q14106 344 aaPredicted RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 SEPT2Q15019 361 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 MFSD14BQ5SR56 506 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 ATXN7L2Q5T6C5 722 aaPredicted RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 TUBA3EQ6PEY2 450 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 CACTINQ8WUQ7 758 aaKnown RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 COA7Q96BR5 231 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 CEP95Q96GE4 821 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 FAM193BQ96PV7 902 aaPredicted RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 NUP88Q99567 741 aaPredicted RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 KCNH6Q9H252 994 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 CEP72Q9P209 647 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 POGKQ9P215 609 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 EIF2B4Q9UI10 523 aaKnown RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 TUBD1Q9UJT1 453 aa6.24□□□□□ -1.41
SSR3-209ENST00000498205 CFAP20Q9Y6A4 193 aaKnown RBP6.24□□□□□ -1.41
SSR3-209ENST00000498205 ATRNL1Q5VV63 1379 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 GAGE12BA1L429 117 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 GAGE12HA6NDE8 117 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 CXorf49A8MYA2 514 aaPredicted RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 FZD7O75084 574 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 AMHP03971 560 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 ATP5JP18859 108 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 KIF23Q02241 960 aaPredicted RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 RAB39AQ14964 217 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 THEMIS2Q5TEJ8 643 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 AFMIDQ63HM1 303 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 SEM1Q6ZVN7 128 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 GGNQ86UU5 652 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 XYLT1Q86Y38 959 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 RHOT1Q8IXI2 618 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 REPS2Q8NFH8 660 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 NLGN4YQ8NFZ3 816 aaPredicted RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 MRI1Q9BV20 369 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 CPEB1Q9BZB8 566 aaKnown RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 AJAP1Q9UKB5 411 aaPredicted RBP6.23□□□□□ -1.41
SSR3-209ENST00000498205 SIK3Q9Y2K2 1263 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 CASKIN1Q8WXD9 1431 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 KIF21AQ7Z4S6 1674 aa6.23□□□□□ -1.41
SSR3-209ENST00000498205 FANCD2Q9BXW9 1451 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 WDR97A6NE52 1622 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 ALDH1L1O75891 902 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 POMCP01189 267 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 RAP2AP10114 183 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 DDCP20711 480 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 TACR2P21452 398 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 SLC6A9P48067 706 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 CTXN1P60606 82 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 CREMQ03060 361 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 MTM1Q13496 603 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 LSM12Q3MHD2 195 aaKnown RBP6.22□□□□□ -1.41
SSR3-209ENST00000498205 ARMC6Q6NXE6 501 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms