RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 LIMCH1Q9UPQ0 1083 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 IPPQ9Y573 584 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 NRP1O14786 923 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 TRIM27P14373 513 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 TNFRSF1AP19438 455 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 CTSSP25774 331 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 ACRV1P26436 265 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 ECHS1P30084 290 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 WNT3AP56704 352 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 PPP3CAQ08209 521 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 GRM3Q14832 879 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 NOMO1Q15155 1222 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 DENND1CQ8IV53 801 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 ELOA2Q8IYF1 753 aaPredicted RBP5.12□□□□□ -1.59
SMC4-225ENST00000497203 CAMKK1Q8N5S9 505 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 LILRA3Q8N6C8 439 aaPredicted RBP5.12□□□□□ -1.59
SMC4-225ENST00000497203 OR5M3Q8NGP4 307 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 SNX33Q8WV41 574 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 ARL8AQ96BM9 186 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 MANSC1Q9H8J5 431 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 DMRT3Q9NQL9 472 aa5.12□□□□□ -1.59
SMC4-225ENST00000497203 OVOL3O00110 214 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 SLC16A6O15403 523 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 SGTAO43765 313 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 PHKG2P15735 406 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 EDNRBP24530 442 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 SCNN1GP51170 649 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 DUSP2Q05923 314 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 UBE4AQ14139 1066 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 NRN1LQ496H8 165 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 USP39Q53GS9 565 aaKnown RBP5.11□□□□□ -1.59
SMC4-225ENST00000497203 Q6ZRM9 215 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 CHST15Q7LFX5 561 aaPredicted RBP5.11□□□□□ -1.59
SMC4-225ENST00000497203 TTC7BQ86TV6 843 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMC4-225ENST00000497203 IL17DQ8TAD2 202 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 ZNF480Q8WV37 535 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 MIEF2Q96C03 454 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 CYFIP2Q96F07 1278 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 ACO2Q99798 780 aaKnown RBP5.11□□□□□ -1.59
SMC4-225ENST00000497203 SARGQ9BW04 601 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 ZNF700Q9H0M5 742 aa5.11□□□□□ -1.59
SMC4-225ENST00000497203 FAM227AF5H4B4 570 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 HOXA3O43365 443 aaPredicted RBP5.1□□□□□ -1.59
SMC4-225ENST00000497203 NBPF7P0C2Y1 421 aaPredicted RBP5.1□□□□□ -1.59
SMC4-225ENST00000497203 PER3P56645 1201 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 MST1LQ2TV78 715 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 C3orf36Q3SXR2 165 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 C1QL3Q5VWW1 255 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 MFSD5Q6N075 450 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 RNF207Q6ZRF8 634 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 C11orf96Q7Z7L8 435 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 ANKRD35Q8N283 1001 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 FAM43AQ8N2R8 423 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 MB21D1Q8N884 522 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 ZBTB34Q8NCN2 500 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 PJA1Q8NG27 643 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 DPF2Q92785 391 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 TIFAQ96CG3 184 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 TMEM60Q9H2L4 133 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 BCO1Q9HAY6 547 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.1□□□□□ -1.59
SMC4-225ENST00000497203 DDX20Q9UHI6 824 aaKnown RBP5.1□□□□□ -1.59
SMC4-225ENST00000497203 POLHQ9Y253 713 aa5.1□□□□□ -1.59
SMC4-225ENST00000497203 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 CYP27B1O15528 508 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 TUSC2O75896 110 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 UBXN7O94888 489 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 ARIH2O95376 493 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 ZBED1O96006 694 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 GASTP01350 101 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 AMHP03971 560 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 HRGP04196 525 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 GYPEP15421 78 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 ADSLP30566 484 aaPredicted RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 CRHR1P34998 444 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 GZMKP49863 264 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 RABGGTBP53611 331 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 RHBDL3P58872 404 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 DGCR2P98153 550 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 CDC42EP1Q00587 391 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 MRPL49Q13405 166 aaKnown RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 OS9Q13438 667 aaPredicted RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 RRP1BQ14684 758 aaKnown RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 BRD3Q15059 726 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 SAFBQ15424 915 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-225ENST00000497203 C1orf210Q8IVY1 113 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 RHOT1Q8IXI2 618 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 MDGA1Q8NFP4 955 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 OR7D4Q8NG98 312 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 HOXB13Q92826 284 aaPredicted RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 RGMAQ96B86 450 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 IL17RAQ96F46 866 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.59
SMC4-225ENST00000497203 ZNF747Q9BV97 191 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 EPC1Q9H2F5 836 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 DDX21Q9NR30 783 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-225ENST00000497203 TDP1Q9NUW8 608 aa5.09□□□□□ -1.59
SMC4-225ENST00000497203 ZMYM3Q14202 1370 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms