RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 DSG1Q02413 1049 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 USP41Q3LFD5 358 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 ZPBP2Q6X784 338 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 C12orf76Q8N812 135 aaPredicted RBP19.7■□□□□ 0.74
COL20A1-207ENST00000494913 LINC00301Q8NCQ3 95 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 HASPINQ8TF76 798 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 BICD1Q96G01 975 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 ACAP3Q96P50 834 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 PPP1R10Q96QC0 940 aaKnown RBP19.7■□□□□ 0.74
COL20A1-207ENST00000494913 TOPORSQ9NS56 1045 aaPredicted RBP19.7■□□□□ 0.74
COL20A1-207ENST00000494913 CHST7Q9NS84 486 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 STK17AQ9UEE5 414 aa19.7■□□□□ 0.74
COL20A1-207ENST00000494913 SMIM28A0A1B0GU29 152 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 TRAK2O60296 914 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 PDIA4P13667 645 aaKnown RBP19.69■□□□□ 0.74
COL20A1-207ENST00000494913 CLCN4P51793 760 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 CBX2Q14781 532 aaPredicted RBP19.69■□□□□ 0.74
COL20A1-207ENST00000494913 FOXD4L6Q3SYB3 417 aaPredicted RBP19.69■□□□□ 0.74
COL20A1-207ENST00000494913 CES5AQ6NT32 575 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 ALKAL1Q6UXT8 129 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 FOXD4L3Q6VB84 417 aaPredicted RBP19.69■□□□□ 0.74
COL20A1-207ENST00000494913 PHF7Q9BWX1 381 aaPredicted RBP19.69■□□□□ 0.74
COL20A1-207ENST00000494913 ADAM7Q9H2U9 754 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 DZANK1Q9NVP4 752 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 CDH22Q9UJ99 828 aa19.69■□□□□ 0.74
COL20A1-207ENST00000494913 PI4K2BG5E9Z4 385 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 K7ENM7 598 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 SPTLC2O15270 562 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 TEX28O15482 410 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 CLDN3O15551 220 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 KIF4AO95239 1232 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 ZSCAN22P10073 491 aaPredicted RBP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 MATR3P43243 847 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 ITIH3Q06033 890 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 RARS2Q5T160 578 aaKnown RBP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 KANK3Q6NY19 840 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 SV2BQ7L1I2 683 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 DYMQ7RTS9 669 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 RIN2Q8WYP3 895 aaPredicted RBP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 RPGRIP1Q96KN7 1286 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 FBXL18Q96ME1 805 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 C1QTNF1Q9BXJ1 281 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 RXFP1Q9HBX9 757 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 TBX20Q9UMR3 447 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 SF3B1O75533 1304 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL20A1-207ENST00000494913 TRIP11Q15643 1979 aa19.68■□□□□ 0.74
COL20A1-207ENST00000494913 ADH1AP07327 375 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 SEZ6Q53EL9 994 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 XKR4Q5GH76 650 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 CCDC73Q6ZRK6 1079 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 SPDYE4A6NLX3 237 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 F13A1P00488 732 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 WEE2P0C1S8 567 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 SCP2P22307 547 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 NMT1P30419 496 aaKnown RBP19.67■□□□□ 0.74
COL20A1-207ENST00000494913 LIG4P49917 911 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 CLCNKBP51801 687 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 MCL1Q07820 350 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 FAM171A1Q5VUB5 890 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 CEP57Q86XR8 500 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 DDX12PQ92771 950 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 KCNN1Q92952 543 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 SNX27Q96L92 541 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 ZMAT2Q96NC0 199 aaKnown RBP19.67■□□□□ 0.74
COL20A1-207ENST00000494913 HAPLN2Q9GZV7 340 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 GOLGA2P5Q9HBQ8 144 aa19.67■□□□□ 0.74
COL20A1-207ENST00000494913 A0A087X0B3 334 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 MYMKA6NI61 221 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 LOC730098B7Z3J9 87 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 HNRNPDLO14979 420 aaKnown RBP19.66■□□□□ 0.74
COL20A1-207ENST00000494913 PPP6R2O75170 966 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 B3GAT3O94766 335 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 ALADP13716 330 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 IGFBP6P24592 240 aaPredicted RBP19.66■□□□□ 0.74
COL20A1-207ENST00000494913 STAT6P42226 847 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 SOX4Q06945 474 aaPredicted RBP19.66■□□□□ 0.74
COL20A1-207ENST00000494913 PKP1Q13835 747 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 DCLRE1AQ6PJP8 1040 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 TMC5Q6UXY8 1006 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 RNF135Q8IUD6 432 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 GLYCTKQ8IVS8 523 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 PDILTQ8N807 584 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 UROC1Q96N76 676 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 FIZ1Q96SL8 496 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 TTPALQ9BTX7 342 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL20A1-207ENST00000494913 SLC38A7Q9NVC3 462 aa19.66■□□□□ 0.74
COL20A1-207ENST00000494913 MEFVO15553 781 aaPredicted RBP19.65■□□□□ 0.74
COL20A1-207ENST00000494913 YEATS4O95619 227 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 GLUD1P00367 558 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 MYBP10242 640 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 KCNE1P15382 129 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 RPL17P18621 184 aaKnown RBP19.65■□□□□ 0.74
COL20A1-207ENST00000494913 GTF2BQ00403 316 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 ELAVL2Q12926 359 aaKnown RBP19.65■□□□□ 0.74
COL20A1-207ENST00000494913 UPP1Q16831 310 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 SLC10A6Q3KNW5 377 aa19.65■□□□□ 0.74
COL20A1-207ENST00000494913 ZC2HC1CQ53FD0 456 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms