RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 AHRRA9YTQ3 701 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 CYR61O00622 381 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 HTRA2O43464 458 aaPredicted RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 XPOTO43592 962 aaKnown RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 ZNF202O95125 648 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 AMHP03971 560 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PCSK1P29120 753 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PTGS2P35354 604 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 NEK2P51955 445 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PER3P56645 1201 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 FAM102AQ5T9C2 384 aaPredicted RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 EFCAB2Q5VUJ9 269 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 METRNLQ641Q3 311 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 LRRC55Q6ZSA7 311 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PLXDC1Q8IUK5 500 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 CMTR2Q8IYT2 770 aaKnown RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 COA7Q96BR5 231 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PGBD4Q96DM1 585 aa5.74□□□□□ -1.49
ITGB1-216ENST00000493758 NUP88Q99567 741 aaPredicted RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 CFAP20Q9Y6A4 193 aaKnown RBP5.74□□□□□ -1.49
ITGB1-216ENST00000493758 PDGFRBP09619 1106 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 ATP5JP18859 108 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 FPR1P21462 350 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 EDNRBP24530 442 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 APOBEC3AP31941 199 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 FXR1P51114 621 aaKnown RBP eCLIP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 ACAP2Q15057 778 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 LSM12Q3MHD2 195 aaKnown RBP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 ATXN7L2Q5T6C5 722 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 AGAP9Q5VTM2 703 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 USP51Q70EK9 711 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 GDF7Q7Z4P5 450 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 PNMA8AQ86V59 439 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 RHOT2Q8IXI1 618 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 ZNF276Q8N554 614 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 MRI1Q9BV20 369 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 DDX56Q9NY93 547 aaKnown RBP5.73□□□□□ -1.49
ITGB1-216ENST00000493758 GPRC5BQ9NZH0 403 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 SLC23A1Q9UHI7 598 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 FZD1Q9UP38 647 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 HS3ST4Q9Y661 456 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
ITGB1-216ENST00000493758 SHROOM4Q9ULL8 1493 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 LEFTY2O00292 366 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 MAKP20794 623 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 NR4A1P22736 598 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 MCM7P33993 719 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 CTXN1P60606 82 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 IGBP1P78318 339 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 DGCR2P98153 550 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 ABHD18Q0P651 414 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 TARDBPQ13148 414 aaKnown RBP eCLIP5.72□□□□□ -1.49
ITGB1-216ENST00000493758 RAB39AQ14964 217 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 ODF1Q14990 250 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 ARMC6Q6NXE6 501 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 ZGPATQ8N5A5 531 aaKnown RBP5.72□□□□□ -1.49
ITGB1-216ENST00000493758 IFI44Q8TCB0 444 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 NSUN6Q8TEA1 469 aaKnown RBP5.72□□□□□ -1.49
ITGB1-216ENST00000493758 MRGPRX4Q96LA9 322 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 CAMKK2Q96RR4 588 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 SERPINB13Q9UIV8 391 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 INTUQ9ULD6 942 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 LIMCH1Q9UPQ0 1083 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 SORCS3Q9UPU3 1222 aa5.72□□□□□ -1.49
ITGB1-216ENST00000493758 MYBBP1AQ9BQG0 1328 aaKnown RBP5.72□□□□□ -1.49
ITGB1-216ENST00000493758 DRGXA6NNA5 263 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 NPIPB8E9PQR5 432 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 ITGB1P05556 798 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 ALAS1P13196 640 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 DDCP20711 480 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
ITGB1-216ENST00000493758 GDF5P43026 501 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 NHLH2Q02577 135 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 PPP4R3AQ6IN85 833 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 ZBTB46Q86UZ6 589 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 CPA6Q8N4T0 437 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 RNF169Q8NCN4 708 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 CPT1CQ8TCG5 803 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 MYEOVQ96EZ4 313 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 NEU1Q99519 415 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 SMAD5Q99717 465 aaKnown RBP5.71□□□□□ -1.5
ITGB1-216ENST00000493758 SPON1Q9HCB6 807 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 TDP1Q9NUW8 608 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 CALCOCO1Q9P1Z2 691 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 DKK2Q9UBU2 259 aa5.71□□□□□ -1.5
ITGB1-216ENST00000493758 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
ITGB1-216ENST00000493758 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 CCDC154A6NI56 674 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
ITGB1-216ENST00000493758 ABLIM3O94929 683 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 SCAF4O95104 1147 aaKnown RBP5.7□□□□□ -1.5
ITGB1-216ENST00000493758 SNUPNO95149 360 aaKnown RBP5.7□□□□□ -1.5
ITGB1-216ENST00000493758 RPLP2P05387 115 aaKnown RBP5.7□□□□□ -1.5
ITGB1-216ENST00000493758 SPATA31D3P0C874 917 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 RAP2AP10114 183 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 GCSHP23434 173 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 BMPR1AP36894 532 aa5.7□□□□□ -1.5
ITGB1-216ENST00000493758 KIF23Q02241 960 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms